ModCRE DB

Transcription factor

Q03052 - POU3F1

POU domain, class 3, transcription factor 1 (Octamer-binding protein 6) (Oct-6) (Octamer-binding transcription factor 6) (OTF-6) (POU domain transcription factor SCIP)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 451 aa

16 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known16
MotifPredictionSourceDNA bindingSupportLogoActions
MA0786.1 Known JASPAR TTATGCAAATTA Direct PWM Open · Scan
MA0786.2 Known JASPAR TTATGCAAAT Direct PWM Open · Scan
M03315_2.00 Known CisBP TTATGCAAATTA Direct PWM Open · Scan
M03316_2.00 Known CisBP ATGCATAATTTA Direct PWM Open · Scan
M05483_2.00 Known CisBP TAATTAGCCGCTAATTA Direct PWM Open · Scan
M05484_2.00 Known CisBP ATAATGAGATGCAT Direct PWM Open · Scan
M05485_2.00 Known CisBP CTAATTTATGCAA Direct PWM Open · Scan
M05486_2.00 Known CisBP TTATGCTAATGAG Direct PWM Open · Scan
M05487_2.00 Known CisBP ATAATGAGATGCGT Direct PWM Open · Scan
M05488_2.00 Known CisBP ACGCATAAATTAA Direct PWM Open · Scan
M05489_2.00 Known CisBP TTATGCGCATAA Direct PWM Open · Scan
M05490_2.00 Known CisBP TTATGCAAATGAG Direct PWM Open · Scan
M05491_2.00 Known CisBP TAATTAACGGGTAATTA Direct PWM Open · Scan
M09221_2.00 Known CisBP CATTGTAATGCAAA Direct PWM Open · Scan
M10849_2.00 Known CisBP CAACTCTAATTCCCC Direct PWM Open · Scan
PO3F1_HUMAN.H11MO.0.C Known HOCOMOCO CATTGTAATGCAAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 451 aa
248-397

Region 248-397 0 PWM

Residues
150 aa
Domains
PF00157 · Pou domain - N-terminal to homeobox domain PF00046 · Homeodomain
3D models
1 active PDB
Templates
5WC9
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 248-3971 model
Actions
Predicted = Low DIMER_Q03052:248:397_5wc9_A_1 5wc9 248-397 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
252-321PF00157Pou domain - N-terminal to homeobox domainoverlaps 248-397
340-396PF00046Homeodomainoverlaps 248-397