ModCRE DB

Transcription factor

Q03936 - ZNF92

Zinc finger protein 92 (Zinc finger protein HTF12)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 586 aa

71 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)8
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 80.0% identity Open · Scan
M07715_2.00 NN 70+% CisBP CCGCCGCCGCCGTGG 75.4% identity Open · Scan
M08295_2.00 NN 70+% CisBP CTGCTGGAATCTCCA 73.7% identity Open · Scan
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 72.2% identity Open · Scan
M08921_2.00 NN 70+% CisBP CCTCATTCTTCTTGGACATG 71.2% identity Open · Scan
M08934_2.00 NN 70+% CisBP GCTGTACCTGCTTATTAGGC 71.0% identity Open · Scan
M08381_2.00 NN 70+% CisBP ACATTTTGTCCTCCTAGTCCT 70.1% identity Open · Scan
M07714_2.00 NN 70+% CisBP AGCCCATTGGGGCCTATGCCC 70.0% identity Open · Scan
Nearest Neighbor (70% - 40%)63
MotifPredictionSourceDNA bindingSupportLogoActions
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 69.9% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 69.6% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 68.8% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 68.3% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 65.6% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 65.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 63.9% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.5% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 63.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 61.5% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 61.4% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.1% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 61.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 60.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 58.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.3% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 57.7% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 57.4% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 57.1% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.8% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.5% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.6% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.5% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 55.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.4% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 54.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 54.1% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 54.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 54.1% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 53.6% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 53.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.2% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 52.9% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 52.7% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.7% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.7% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 52.5% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 52.5% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 52.3% identity Open · Scan
M08889_2.00 NN 70-40% CisBP GCTGCTCTTTTT 52.1% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 52.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.6% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 51.6% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.1% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.9% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.7% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.4% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 586 aa
226-504

Region 226-504 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 226-5041 model
Actions
Predicted = Low TFS_Q03936:226:504_5wjq_D_1 5wjq 226-504 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-44PF01352KRAB boxNo overlap with loaded model regions
201-223PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
229-251PF00096Zinc finger, C2H2 typeoverlaps 226-504
257-279PF00096Zinc finger, C2H2 typeoverlaps 226-504
285-307PF00096Zinc finger, C2H2 typeoverlaps 226-504
313-335PF00096Zinc finger, C2H2 typeoverlaps 226-504
341-363PF00096Zinc finger, C2H2 typeoverlaps 226-504
369-391PF00096Zinc finger, C2H2 typeoverlaps 226-504
397-419PF00096Zinc finger, C2H2 typeoverlaps 226-504
425-447PF00096Zinc finger, C2H2 typeoverlaps 226-504
453-475PF00096Zinc finger, C2H2 typeoverlaps 226-504
481-503PF00096Zinc finger, C2H2 typeoverlaps 226-504