ModCRE DB

Transcription factor

Q03938 - ZNF90

Zinc finger protein 90 (Zinc finger protein HTF9)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 601 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07761_2.00 Known CisBP CTGATTATTCACCCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 601 aa
210-363

Region 210-363 0 PWM

Residues
154 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 210-3631 model
Actions
Predicted = Low TFS_Q03938:210:363_2i13_A_1 2i13 210-363 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-44PF01352KRAB boxNo overlap with loaded model regions
173-195PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
201-223PF00096Zinc finger, C2H2 typeoverlaps 210-363
229-251PF00096Zinc finger, C2H2 typeoverlaps 210-363
257-279PF00096Zinc finger, C2H2 typeoverlaps 210-363
313-335PF00096Zinc finger, C2H2 typeoverlaps 210-363
341-363PF00096Zinc finger, C2H2 typeoverlaps 210-363
369-391PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
397-419PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
425-447PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
453-475PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
481-503PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
509-531PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
537-559PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
565-587PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions