Transcription factor

Q03989 - ARID5A

AT-rich interactive domain-containing protein 5A (ARID domain-containing protein 5A) (Modulator recognition factor 1) (MRF-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 594 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3

Motif	Prediction	Source	DNA binding	Support	Actions
MA0602.1	NN 70+%	JASPAR	CTAATATTGCTAAA	76.5% identity	Open · Scan
M01663_2.00	NN 70+%	CisBP	TCGATATTGC	76.2% identity	Open · Scan
M01661_2.00	NN 70+%	CisBP	CAATATCG	71.3% identity	Open · Scan

Nearest Neighbor (70% - 40%)2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M01668_2.00	NN 70-40%	CisBP	TGCTATAGCA	61.5% identity		Open · Scan
M01657_2.00	NN 70-40%	CisBP	TGATATTA	57.9% identity		Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 594 aa

51-142

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 51-1421 model

				Actions
Predicted = Low	TFS_Q03989:51:142_1kqq_A_1	1kqq	51-142	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
58-142	PF01388	ARID/BRIGHT DNA binding domain	overlaps 51-142