ModCRE DB

Transcription factor

Q05516 - ZBTB16

Zinc finger and BTB domain-containing protein 16 (Promyelocytic leukemia zinc finger protein) (Zinc finger protein 145) (Zinc finger protein PLZF)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 673 aa

14 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)8
MotifPredictionSourceDNA bindingSupportLogoActions
MA1580.1 NN 70-40% JASPAR TGTACAGTAT 68.3% identity Open · Scan
M00143_2.00 NN 70-40% CisBP CCCCCCCACG 54.8% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 54.8% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 50.8% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 50.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 50.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 50.5% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q05516_ZBT16_HUMAN:572:610_1llm_D_1 ModCRE Homology model ACCCGCCGGGGA Region 572-610 · 1 3D model Open · Scan
TFS_sp_Q05516_ZBT16_HUMAN:405:652_5wjq_D_1 ModCRE Homology model CGACGCCCGGCGTGGCCCCGGCGGCGGG Region 405-652 · 1 3D model Open · Scan
TFS_sp_Q05516_ZBT16_HUMAN:405:656_5v3j_E_1 ModCRE Homology model GGGGACTACACGGGGGGGGGGAC Region 405-656 · 1 3D model Open · Scan
TFS_sp_Q05516_ZBT16_HUMAN:405:656_5v3m_C_1 ModCRE Homology model GGGGCGCTTGGCCCCGGGGGGGCT Region 405-656 · 1 3D model Open · Scan
TFS_sp_Q05516_ZBT16_HUMAN:457:600_6ml7_A_1 ModCRE Homology model CTACGGCGGCACTGGTATG Region 457-600 · 1 3D model Open · Scan
TFS_sp_Q05516_ZBT16_HUMAN:470:624_2i13_A_1 ModCRE Homology model GTTTACCTGCCCCTACTAAAC Region 470-624 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 673 aa
405-656

Region 405-656 6 PWM

Residues
252 aa
Domains
PF13912 · C2H2-type zinc finger PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 6ML7
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 405-6566 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q05516_ZBT16_HUMAN:572:610_1llm_D_1 1llm 572-610 View model · PDB
Predicted = Low TFS_sp_Q05516_ZBT16_HUMAN:405:652_5wjq_D_1 5wjq 405-652 View model · PDB
Predicted = Low TFS_sp_Q05516_ZBT16_HUMAN:405:656_5v3j_E_1 5v3j 405-656 View model · PDB
Predicted = Low TFS_sp_Q05516_ZBT16_HUMAN:405:656_5v3m_C_1 5v3m 405-656 View model · PDB
Predicted = Low TFS_sp_Q05516_ZBT16_HUMAN:457:600_6ml7_A_1 6ml7 457-600 View model · PDB
Predicted = Low TFS_sp_Q05516_ZBT16_HUMAN:470:624_2i13_A_1 2i13 470-624 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 405:657 572,572 610,610 P:C,D · DNA:A,B 48.7% / 64.1% 44,45 View · PDB DIMER_sp_Q05516_ZBT16_HUMAN:572:610_1llm_D_1
4 2i13 405:657 470 624 P:A · DNA:C,D 42.6% / 56.1% 100 View · PDB TFS_sp_Q05516_ZBT16_HUMAN:470:624_2i13_A_1
5 6ml7 405:657 457 600 P:A · DNA:E,F 38.2% / 61.1% 100 View · PDB TFS_sp_Q05516_ZBT16_HUMAN:457:600_6ml7_A_1
1 5wjq 405:657 405 652 P:D · DNA:A,B 36.7% / 54.8% 87 View · PDB TFS_sp_Q05516_ZBT16_HUMAN:405:652_5wjq_D_1
2 5v3m 405:657 405 656 P:C · DNA:A,B 34.5% / 52.8% 90 View · PDB TFS_sp_Q05516_ZBT16_HUMAN:405:656_5v3m_C_1
3 5v3j 405:657 405 656 P:E · DNA:A,B 34.5% / 52.8% 90 View · PDB TFS_sp_Q05516_ZBT16_HUMAN:405:656_5v3j_E_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
25-124PF00651BTB/POZ domainNo overlap with loaded model regions
460-483PF13912C2H2-type zinc fingeroverlaps 405-656
518-540PF13912C2H2-type zinc fingeroverlaps 405-656
546-568PF00096Zinc finger, C2H2 typeoverlaps 405-656
574-596PF00096Zinc finger, C2H2 typeoverlaps 405-656