ModCRE DB

Transcription factor

Q05BW2 - MXD3

Max dimerization protein 3 (Max-associated protein 3)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 363 aa

12 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M08051_2.00 NN 70-40% CisBP CGACCACGTGCCC 55.5% identity Open · Scan
MA1108.1 NN 70-40% JASPAR CGACCACGTGCCC 50.0% identity Open · Scan
ModCRE10
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:136_1nlw_A_1 ModCRE Homology model GTGTCCCGCGCGCGCCCC Region 59-136 · 1 3D model Open · Scan
DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:138_5i50_A_1 ModCRE Homology model ATGTGCCCCACGGGGCCCCCGA Region 59-138 · 1 3D model Open · Scan
DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:138_8ia3_B_1 ModCRE Homology model GGTAAAAATTTTTTAAAA Region 59-138 · 1 3D model Open · Scan
DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:158_8ia3_A_1 ModCRE Homology model CTCTCACACTTTGTCAAA Region 59-158 · 1 3D model Open · Scan
DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:158_8ia3_E_1 ModCRE Homology model CTCTCAAAAATTGGGCAA Region 59-158 · 1 3D model Open · Scan
TFS_tr_Q05BW2_Q05BW2_HUMAN:53:139_1nkp_A_1 ModCRE Homology model AAAAAAGACGTTGGTATA Region 53-139 · 1 3D model Open · Scan
TFS_tr_Q05BW2_Q05BW2_HUMAN:59:135_8ots_M_1 ModCRE Homology model GTTACGCGTGTTGCCCGTTGAGTCCAGCGCCGCGCGCGTCGTAACCTTCTTAGACTAACGTGTCCTCGTCCGCGGTGGGGGTTTCACC Region 59-135 · 1 3D model Open · Scan
TFS_tr_Q05BW2_Q05BW2_HUMAN:59:136_1nlw_A_1 ModCRE Homology model ACGACGCGCGCGGGTCAA Region 59-136 · 1 3D model Open · Scan
TFS_tr_Q05BW2_Q05BW2_HUMAN:59:138_5i50_A_1 ModCRE Homology model TCGGGGCCCCCGTGGGGCACAT Region 59-138 · 1 3D model Open · Scan
TFS_tr_Q05BW2_Q05BW2_HUMAN:59:158_8ia3_A_1 ModCRE Homology model GTTGACAAAGTGAGATTT Region 59-158 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 363 aa
53-158

Region 53-158 10 PWM

Residues
106 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
10 active PDBs · 10 summary rows
Templates
1NKP, 1NLW, 5I50, 8IA3, 8OTS
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 10 summary rows
Region 53-15810 models · 10 summary rows
Actions
Predicted = Low DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:136_1nlw_A_1 1nlw 59-136 View model · PDB
Predicted = Low DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:138_5i50_A_1 5i50 59-138 View model · PDB
Predicted = Low DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:138_8ia3_B_1 8ia3 59-138 View model · PDB
Predicted = Low DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:158_8ia3_A_1 8ia3 59-158 View model · PDB
Predicted = Low DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:158_8ia3_E_1 8ia3 59-158 View model · PDB
Predicted = Low TFS_tr_Q05BW2_Q05BW2_HUMAN:53:139_1nkp_A_1 1nkp 53-139 View model · PDB
Predicted = Low TFS_tr_Q05BW2_Q05BW2_HUMAN:59:135_8ots_M_1 8ots 59-135 View model · PDB
Predicted = Low TFS_tr_Q05BW2_Q05BW2_HUMAN:59:136_1nlw_A_1 1nlw 59-136 View model · PDB
Predicted = Low TFS_tr_Q05BW2_Q05BW2_HUMAN:59:138_5i50_A_1 5i50 59-138 View model · PDB
Predicted = Low TFS_tr_Q05BW2_Q05BW2_HUMAN:59:158_8ia3_A_1 8ia3 59-158 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1nlw 53:158 59,59 136,134 P:A,B · DNA:F,G 52.6% / 78.2% 98,98 View · PDB TFS_tr_Q05BW2_Q05BW2_HUMAN:59:136_1nlw_A_1
1 1nlw 53:158 59,59 136,134 P:A,B · DNA:F,G 52.6% / 78.2% 98,98 View · PDB DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:136_1nlw_A_1
2 5i50 53:158 59,59 138,138 P:A,B · DNA:C,D 31.2% / 57.5% 86,83 View · PDB DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:138_5i50_A_1
3 5i50 53:158 59,59 138,138 P:A,B · DNA:C,D 31.2% / 57.5% 86,83 View · PDB TFS_tr_Q05BW2_Q05BW2_HUMAN:59:138_5i50_A_1
2 1nkp 53:158 53 139 P:A · DNA:F,G 31.0% / 58.6% 98 View · PDB TFS_tr_Q05BW2_Q05BW2_HUMAN:53:139_1nkp_A_1
4 8ots 53:158 59 135 P:M · DNA:I,J 29.9% / 59.7% 97 View · PDB TFS_tr_Q05BW2_Q05BW2_HUMAN:59:135_8ots_M_1
5 8ia3 53:158 59,59 138,138 P:B,F · DNA:G,H 29.1% / 58.1% 80,76 View · PDB DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:138_8ia3_B_1
3 8ia3 53:158 59,59 158,138 P:A,F · DNA:G,H 28.3% / 55.7% 91,76 View · PDB DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:158_8ia3_A_1
4 8ia3 53:158 59,59 158,138 P:E,F · DNA:G,H 28.3% / 55.7% 89,76 View · PDB DIMER_tr_Q05BW2_Q05BW2_HUMAN:59:158_8ia3_E_1
5 8ia3 53:158 59,59 158,138 P:A,F · DNA:G,H 28.3% / 55.7% 91,76 View · PDB TFS_tr_Q05BW2_Q05BW2_HUMAN:59:158_8ia3_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
59-110PF00010Helix-loop-helix DNA-binding domainoverlaps 53-158