ModCRE DB

Transcription factor

Q06413 - MEF2C

Myocyte-specific enhancer factor 2C (Myocyte enhancer factor 2C)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 473 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known10
MotifPredictionSourceDNA bindingSupportLogoActions
MA0497.1 Known JASPAR ATGCTAAAAATAGAA Direct PWM Open · Scan
MA0497.2 Known JASPAR CTAAAAATAGA Direct PWM Open · Scan
M02745_2.00 Known CisBP TACTAAAAATAG Direct PWM Open · Scan
M05551_2.00 Known CisBP CCAAATTTGG Direct PWM Open · Scan
M05552_2.00 Known CisBP CTAAATTTGG Direct PWM Open · Scan
M07980_2.00 Known CisBP ATGCCAAAAATAGCA Direct PWM Open · Scan
M08149_2.00 Known CisBP ATGCTAAAAATAGAA Direct PWM Open · Scan
M09248_2.00 Known CisBP GCTAAAAATAGCA Direct PWM Open · Scan
M09597_2.00 Known CisBP GCTAAAAATAGC Direct PWM Open · Scan
MEF2C_HUMAN.H11MO.0.A Known HOCOMOCO TGCTATTTTTAGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 473 aa
2-72

Region 2-72 0 PWM

Residues
71 aa
Domains
PF00319 · SRF-type transcription factor (DNA-binding and dimerisation domain)
3D models
1 active PDB
Templates
3MU6
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 2-721 model
Actions
Predicted = Low DIMER_Q06413:2:72_3mu6_B_1 3mu6 2-72 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
10-57PF00319SRF-type transcription factor (DNA-binding and dimerisation domain)overlaps 2-72
95-154PF12347Holliday junction regulator protein family C-terminal repeatNo overlap with loaded model regions