ModCRE DB

Transcription factor

Q09FC8 - ZNF415

Zinc finger protein 415

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 603 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known3
MotifPredictionSourceDNA bindingSupportLogoActions
M08252_2.00 Known CisBP CCGGCTCCAGCACCC Direct PWM Open · Scan
M05850_2.00 Known CisBP CTACACGATTAATATC Direct PWM Open · Scan
M08337_2.00 Known CisBP CCGGCTCCAGCACCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 603 aa
292-452

Region 292-452 0 PWM

Residues
161 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 292-4521 model
Actions
Predicted = Low TFS_Q09FC8:292:452_5t0u_A_1 5t0u 292-452 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
292-314PF00096Zinc finger, C2H2 typeoverlaps 292-452
320-342PF00096Zinc finger, C2H2 typeoverlaps 292-452
348-370PF00096Zinc finger, C2H2 typeoverlaps 292-452
376-398PF00096Zinc finger, C2H2 typeoverlaps 292-452
404-426PF00096Zinc finger, C2H2 typeoverlaps 292-452
432-454PF00096Zinc finger, C2H2 typeoverlaps 292-452
460-482PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
488-510PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
516-538PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
544-566PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
572-594PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions