ModCRE DB

Transcription factor

Q0VGA0 - GLI2

GLI2 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 725 aa

33 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA0734.1 NN 70+% JASPAR GCGACCACACTG 97.3% identity Open · Scan
M01024_2.00 NN 70+% CisBP GGACCACCCA 91.0% identity Open · Scan
M03702_2.00 NN 70+% CisBP GACCCCCCACGACGC 76.2% identity Open · Scan
Nearest Neighbor (70% - 40%)30
MotifPredictionSourceDNA bindingSupportLogoActions
M01529_2.00 NN 70-40% CisBP CCCCGCATT 66.6% identity Open · Scan
MA0735.1 NN 70-40% JASPAR AGACCCCCCACGAAGC 63.6% identity Open · Scan
M01022_2.00 NN 70-40% CisBP GGACCACCCAC 63.0% identity Open · Scan
MA1491.1 NN 70-40% JASPAR AGACCACCCACGTCG 61.1% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 60.7% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 60.5% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 59.6% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 59.5% identity Open · Scan
M04486_2.00 NN 70-40% CisBP GACCCCCTGCTGTGC 57.6% identity Open · Scan
M04409_2.00 NN 70-40% CisBP GGCGGCCATTTTGG 55.7% identity Open · Scan
M06133_2.00 NN 70-40% CisBP CAGACCCCCCGCGGA 55.6% identity Open · Scan
M00780_2.00 NN 70-40% CisBP GACCCCCCGG 55.5% identity Open · Scan
M08233_2.00 NN 70-40% CisBP CCCCTGCTGGG 55.5% identity Open · Scan
MA1584.1 NN 70-40% JASPAR CGACCCCCCGCTGTGC 55.5% identity Open · Scan
MA1628.1 NN 70-40% JASPAR CACAGCAGGGG 55.5% identity Open · Scan
MA0751.1 NN 70-40% JASPAR GACCCCCCGCTGTGC 55.4% identity Open · Scan
M00621_2.00 NN 70-40% CisBP CCCGCTGTGA 55.2% identity Open · Scan
M02643_2.00 NN 70-40% CisBP GACCACCCACG 54.9% identity Open · Scan
M09013_2.00 NN 70-40% CisBP GGCCCCCTGCTGTGA 54.8% identity Open · Scan
MA0696.1 NN 70-40% JASPAR GACCCCCCGCTGTG 54.8% identity Open · Scan
MA0697.1 NN 70-40% JASPAR GACCCCCCGCTGCGC 54.8% identity Open · Scan
MA0736.1 NN 70-40% JASPAR GACCCCCCGCGAAG 53.2% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 52.7% identity Open · Scan
M00129_2.00 NN 70-40% CisBP AGACCCCCCAC 52.0% identity Open · Scan
M02673_2.00 NN 70-40% CisBP GAACCCCCA 52.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.9% identity Open · Scan
M06161_2.00 NN 70-40% CisBP CAGGGCTGCAAAACACCC 51.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 50.6% identity Open · Scan
M08275_2.00 NN 70-40% CisBP CGCTCCCGGGCCCCC 50.0% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 725 aa
419-573

Region 419-573 0 PWM

Residues
155 aa
Domains
PF23561 · C2H2 zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2GLI
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 419-5731 model
Actions
Predicted = Low TFS_Q0VGA0:419:573_2gli_A_1 2gli 419-573 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
455-484PF23561C2H2 zinc fingeroverlaps 419-573
486-510PF00096Zinc finger, C2H2 typeoverlaps 419-573
516-541PF00096Zinc finger, C2H2 typeoverlaps 419-573
547-572PF00096Zinc finger, C2H2 typeoverlaps 419-573