ModCRE DB

Transcription factor

Q10587 - TEF

Thyrotroph embryonic factor

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 303 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0843.1 Known JASPAR TATTACGTAACA Direct PWM Open · Scan
MA0843.2 Known JASPAR ATTACGTAAC Direct PWM Open · Scan
M02849_2.00 Known CisBP TGTTACGTAATA Direct PWM Open · Scan
M02850_2.00 Known CisBP TGTTATGTAATA Direct PWM Open · Scan
M04325_2.00 Known CisBP CGTTACGTAACC Direct PWM Open · Scan
M04326_2.00 Known CisBP CGTTACATAACA Direct PWM Open · Scan
M09986_2.00 Known CisBP ATTACGTAAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 303 aa
230-292

Region 230-292 0 PWM

Residues
63 aa
Domains
PF07716 · Basic region leucine zipper
3D models
1 active PDB
Templates
1GTW
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 230-2921 model
Actions
Predicted = Low DIMER_Q10587:230:292_1gtw_B_1 1gtw 230-292 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
232-285PF07716Basic region leucine zipperoverlaps 230-292