ModCRE DB

Transcription factor

Q12800 - TFCP2

Alpha-globin transcription factor CP2 (SAA3 enhancer factor) (Transcription factor LSF)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 502 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA1968.1 Known JASPAR AAACCGGTTT Direct PWM Open · Scan
MA1968.2 Known JASPAR AAACCGGTT Direct PWM Open · Scan
M03074_2.00 Known CisBP AAACCGGTTT Direct PWM Open · Scan
M03075_2.00 Known CisBP ACCGGTTTAAACCGGT Direct PWM Open · Scan
M04889_2.00 Known CisBP AACCGGTTCAAACCGGTT Direct PWM Open · Scan
M04890_2.00 Known CisBP AACCGGTTTAAACCGGTT Direct PWM Open · Scan
M04891_2.00 Known CisBP AACCGGTTAAAACCGGTT Direct PWM Open · Scan
M04892_2.00 Known CisBP AACCGGTTTAAACCGGTT Direct PWM Open · Scan
M10610_2.00 Known CisBP CTGGGTAGAGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 502 aa
67-256

Region 67-256 0 PWM

Residues
190 aa
Domains
PF04516 · CP2 transcription factor
3D models
1 active PDB
Templates
5MPF
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 67-2561 model
Actions
Predicted = Low TFS_Q12800:67:256_5mpf_A_1 5mpf 67-256 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
53-258PF04516CP2 transcription factoroverlaps 67-256
323-382PF18016SAM domain (Sterile alpha motif)No overlap with loaded model regions
426-502PF25416GRHL1-like, C-terminal domainNo overlap with loaded model regions