ModCRE DB

Transcription factor

Q12837 - POU4F2

POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brain-3B) (Brn-3B)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 409 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0683.1 Known JASPAR ATGCATAATTAATGAG Direct PWM Open · Scan
MA0683.2 Known JASPAR TGCATAATTAATGAG Direct PWM Open · Scan
M03310_2.00 Known CisBP CTCATTAATTATGCAT Direct PWM Open · Scan
M03311_2.00 Known CisBP CTCATTAATTATGCAT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 409 aa
250-402

Region 250-402 0 PWM

Residues
153 aa
Domains
PF00157 · Pou domain - N-terminal to homeobox domain PF00046 · Homeodomain
3D models
1 active PDB
Templates
3L1P
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 250-4021 model
Actions
Predicted = Low DIMER_Q12837:250:402_3l1p_A_1 3l1p 250-402 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
255-327PF00157Pou domain - N-terminal to homeobox domainoverlaps 250-402
346-402PF00046Homeodomainoverlaps 250-402