ModCRE DB

Transcription factor

Q13342 - SP140

Nuclear body protein SP140 (Lymphoid-restricted homolog of Sp100) (LYSp100) (Nuclear autoantigen Sp-140) (Speckled 140 kDa)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 867 aa

7 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M00191_2.00 NN 70-40% CisBP TTTTTCGTAA 61.9% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
q13342.af3.0 ModCRE AlphaFold3 model TTTTTCCAAAGTTTAAAAA AlphaFold3 model · ModCRE PWM Open · Scan
q13342.af3.1 ModCRE AlphaFold3 model TTTTTCGATGGTGGAAAAAAG AlphaFold3 model · ModCRE PWM Open · Scan
q13342.af3.2 ModCRE AlphaFold3 model TTTTTCCACAGTGCCAAACCGC AlphaFold3 model · ModCRE PWM Open · Scan
q13342.af3.3 ModCRE AlphaFold3 model TTTTTCCAAAGTTTAAAAA AlphaFold3 model · ModCRE PWM Open · Scan
q13342.af3.4 ModCRE AlphaFold3 model ACCCGTTTTGCCATTTTGCAAAAA AlphaFold3 model · ModCRE PWM Open · Scan
q13342.af3.5 ModCRE AlphaFold3 model TTTTTTCACAGTTGCAACGGCAAAAAGCG AlphaFold3 model · ModCRE PWM Open · Scan
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
SourceModelTemplateResidues modeledActions
Predicted = Lowq13342.af3.0-Full sequenceView model · PDB
Predicted = Lowq13342.af3.1-Full sequenceView model · PDB
Predicted = Lowq13342.af3.2-Full sequenceView model · PDB
Predicted = Lowq13342.af3.3-Full sequenceView model · PDB
Predicted = Lowq13342.af3.4-Full sequenceView model · PDB
Predicted = Lowq13342.af3.5-Full sequenceView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomain
40-136PF03172HSR domain
584-660PF01342SAND domain
693-733PF00628PHD-finger
793-835PF00439Bromodomain