Transcription factor

Q13398 - ZNF211

Zinc finger protein 211 (Zinc finger protein C2H2-25)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 564 aa

88 Generated PWM 15 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known3

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
MA1974.1	Known	JASPAR	AATATATACCATATA	Direct PWM		Open · Scan
MA1974.2	Known	JASPAR	TATATACCAT	Direct PWM		Open · Scan
M07577_2.00	Known	CisBP	ATGGTATAT	Direct PWM		Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)76

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	65.8% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	65.8% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	64.7% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	64.7% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	64.7% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	64.7% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	63.5% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	63.5% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	62.3% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	62.0% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	61.1% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	60.1% identity		Open · Scan
M07613_2.00	NN 70-40%	CisBP	TCACTCAGTCATTCA	59.2% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	58.8% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	58.4% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	58.4% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	57.8% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	57.5% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	56.9% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	56.4% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	56.2% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	56.0% identity		Open · Scan
M08234_2.00	NN 70-40%	CisBP	GTCAACTTGACTGGGCCA	55.9% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	55.7% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	55.5% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	55.2% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	54.7% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	54.7% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	54.6% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	54.4% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	54.4% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	54.1% identity		Open · Scan
M04590_2.00	NN 70-40%	CisBP	TGCGCTAACCATTGC	53.8% identity		Open · Scan
M07582_2.00	NN 70-40%	CisBP	TCCCTG	53.6% identity		Open · Scan
M07656_2.00	NN 70-40%	CisBP	TGTCTAGTAAGTCTA	53.6% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	53.1% identity		Open · Scan
M07746_2.00	NN 70-40%	CisBP	CAGCTGGCGCCCAACATGGGTCCC	53.1% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	52.9% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	52.8% identity		Open · Scan
M07660_2.00	NN 70-40%	CisBP	CCGCGCCTACCTGAGGGCGCGGGCCTGGGG	52.6% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	52.6% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	52.6% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	52.5% identity		Open · Scan
M07633_2.00	NN 70-40%	CisBP	CTCTCGTTGTGCCTTTGCCAT	52.5% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	52.5% identity		Open · Scan
M04610_2.00	NN 70-40%	CisBP	CGGCGACGCGAACAC	52.2% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	52.2% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	52.2% identity		Open · Scan
MA1592.1	NN 70-40%	JASPAR	GGTATGAGTTCTCGCT	52.1% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	52.0% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	52.0% identity		Open · Scan
M05844_2.00	NN 70-40%	CisBP	TCACCTGT	52.0% identity		Open · Scan
MA0103.1	NN 70-40%	JASPAR	CACCTG	52.0% identity		Open · Scan
MA0103.2	NN 70-40%	JASPAR	CCTCACCTG	52.0% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	51.9% identity		Open · Scan
M03671_2.00	NN 70-40%	CisBP	ATTACCATACAAGTGCAC	51.7% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	51.5% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	51.1% identity		Open · Scan
M07754_2.00	NN 70-40%	CisBP	CGCCCCCTCCCT	51.0% identity		Open · Scan
M07686_2.00	NN 70-40%	CisBP	TAGCTTGTTTCCAGCCAC	50.9% identity		Open · Scan
M07566_2.00	NN 70-40%	CisBP	TCAAACCATCCTTGC	50.7% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	50.7% identity		Open · Scan
M07685_2.00	NN 70-40%	CisBP	CTTTCCAGCCAC	50.7% identity		Open · Scan
M07691_2.00	NN 70-40%	CisBP	CCTGCAGCCACCTTGGCCTTG	50.6% identity		Open · Scan
M07777_2.00	NN 70-40%	CisBP	GCCAATTTCCGTGGTGTAAAT	50.6% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	50.6% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	50.5% identity		Open · Scan
M07702_2.00	NN 70-40%	CisBP	CTTCTTCCTTGG	50.5% identity		Open · Scan
M07601_2.00	NN 70-40%	CisBP	CAGATGCCGGCACCATGCTTC	50.4% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	50.3% identity		Open · Scan
M07590_2.00	NN 70-40%	CisBP	TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT	50.1% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	50.0% identity		Open · Scan
M01457_2.00	NN 70-40%	CisBP	GCGCACGGAC	50.0% identity		Open · Scan
M02731_2.00	NN 70-40%	CisBP	CACTTTCACTTT	50.0% identity		Open · Scan
M06068_2.00	NN 70-40%	CisBP	GGGAATCCCCT	50.0% identity		Open · Scan
MA0508.1	NN 70-40%	JASPAR	AGAAAGTGAAAGTGA	50.0% identity		Open · Scan

ModCRE9

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_sp_Q13398_ZN211_HUMAN:105:225_5v3m_C_1	ModCRE	Homology model	TTGATTTTTTAAAAACGCTTA	Region 105-225 · 1 3D model		Open · Scan
TFS_sp_Q13398_ZN211_HUMAN:112:222_2i13_A_1	ModCRE	Homology model	TACGTTTCTCTCCAGGGTAAC	Region 112-222 · 1 3D model		Open · Scan
TFS_sp_Q13398_ZN211_HUMAN:112:280_5wjq_D_1	ModCRE	Homology model	TAAACGGGGCCTCGAGGTTGGGGCTTT	Region 112-280 · 1 3D model		Open · Scan
TFS_sp_Q13398_ZN211_HUMAN:136:280_5v3j_E_1	ModCRE	Homology model	ATGCTTCTTTTATGCC	Region 136-280 · 1 3D model		Open · Scan
TFS_sp_Q13398_ZN211_HUMAN:136:280_5v3m_C_1	ModCRE	Homology model	ATGGACTCCAGAGTTGG	Region 136-280 · 1 3D model		Open · Scan
TFS_sp_Q13398_ZN211_HUMAN:140:228_5egb_A_1	ModCRE	Homology model	CCCGGGTTTCTAGCCTT	Region 140-228 · 1 3D model		Open · Scan
TFS_sp_Q13398_ZN211_HUMAN:140:228_5eh2_F_1	ModCRE	Homology model	ACCGGGGGGGCAATCCTT	Region 140-228 · 1 3D model		Open · Scan
TFS_sp_Q13398_ZN211_HUMAN:140:228_5ei9_E_1	ModCRE	Homology model	CCCGGGGGGTTAGCCC	Region 140-228 · 1 3D model		Open · Scan
TFS_sp_Q13398_ZN211_HUMAN:144:279_2i13_A_1	ModCRE	Homology model	CAGCGCGTGACTTCTTGCTCT	Region 144-279 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 564 aa

105-559

Region 105-559 9 PWM

Residues

455 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

15 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5EGB, 5EH2, 5EI9, 5V3J, 5V3M, 5WJQ, ...

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

15 active PDB models 6 summary rows

Region 105-55915 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_sp_Q13398_ZN211_HUMAN:395:446_1llm_D_1	1llm	395-446	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:105:225_5v3m_C_1	5v3m	105-225	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:112:222_2i13_A_1	2i13	112-222	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:112:280_5wjq_D_1	5wjq	112-280	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:136:280_5v3j_E_1	5v3j	136-280	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:136:280_5v3m_C_1	5v3m	136-280	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:140:228_5egb_A_1	5egb	140-228	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:140:228_5eh2_F_1	5eh2	140-228	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:140:228_5ei9_E_1	5ei9	140-228	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:144:279_2i13_A_1	2i13	144-279	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:257:555_7w1m_H_1	7w1m	257-555	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:282:559_5wjq_D_1	5wjq	282-559	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:284:559_5v3j_E_1	5v3j	284-559	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:284:559_5v3m_C_1	5v3m	284-559	View model · PDB
Predicted = Low	TFS_sp_Q13398_ZN211_HUMAN:303:447_2i13_A_1	2i13	303-447	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	257:559	303	447	P:A · DNA:C,D	60.0% / 74.5%	94	View · PDB TFS_sp_Q13398_ZN211_HUMAN:303:447_2i13_A_1
1	5wjq	257:559	282	559	P:D · DNA:A,B	48.9% / 68.7%	98	View · PDB TFS_sp_Q13398_ZN211_HUMAN:282:559_5wjq_D_1
2	5v3m	257:559	284	559	P:C · DNA:A,B	48.9% / 68.1%	99	View · PDB TFS_sp_Q13398_ZN211_HUMAN:284:559_5v3m_C_1
3	5v3j	257:559	284	559	P:E · DNA:A,B	48.9% / 68.1%	99	View · PDB TFS_sp_Q13398_ZN211_HUMAN:284:559_5v3j_E_1
1	1llm	257:559	395,395	446,446	P:C,D · DNA:A,B	42.3% / 59.6%	59,61	View · PDB DIMER_sp_Q13398_ZN211_HUMAN:395:446_1llm_D_1
5	7w1m	257:559	257	555	P:H · DNA:F,G	35.4% / 52.9%	92	View · PDB TFS_sp_Q13398_ZN211_HUMAN:257:555_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
32-73	PF01352	KRAB box	No overlap with loaded model regions
257-279	PF00096	Zinc finger, C2H2 type	overlaps 105-559
285-307	PF00096	Zinc finger, C2H2 type	overlaps 105-559
313-335	PF00096	Zinc finger, C2H2 type	overlaps 105-559
341-363	PF00096	Zinc finger, C2H2 type	overlaps 105-559
369-391	PF00096	Zinc finger, C2H2 type	overlaps 105-559
397-419	PF00096	Zinc finger, C2H2 type	overlaps 105-559
425-447	PF00096	Zinc finger, C2H2 type	overlaps 105-559
453-475	PF00096	Zinc finger, C2H2 type	overlaps 105-559
482-503	PF00096	Zinc finger, C2H2 type	overlaps 105-559
509-531	PF00096	Zinc finger, C2H2 type	overlaps 105-559
537-559	PF00096	Zinc finger, C2H2 type	overlaps 105-559