Transcription factor

Q13562 - NEUROD1

Neurogenic differentiation factor 1 (NeuroD) (NeuroD1) (Class A basic helix-loop-helix protein 3) (bHLHa3)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 356 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7

Motif	Prediction	Source	DNA binding	Support	Actions
MA1109.1	Known	JASPAR	GGACAGATGGCAG	Direct PWM	Open · Scan
MA1109.2	Known	JASPAR	ACAGATGG	Direct PWM	Open · Scan
M04148_2.00	Known	CisBP	GCCATATGGCGCGGTATTT	Direct PWM	Open · Scan
M04149_2.00	Known	CisBP	GACATATGTCGCGCTATTT	Direct PWM	Open · Scan
M08057_2.00	Known	CisBP	GGACAGATGGCAG	Direct PWM	Open · Scan
M08735_2.00	Known	CisBP	GACAGATGGT	Direct PWM	Open · Scan
NDF1_HUMAN.H11MO.0.A	Known	HOCOMOCO	GACAGATGGT	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 356 aa

101-157

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 101-1571 model

				Actions
Predicted = Low	DIMER_Q13562:101:157_2ypa_A_1	2ypa	101-157	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
102-152	PF00010	Helix-loop-helix DNA-binding domain	overlaps 101-157
160-284	PF12533	Neuronal helix-loop-helix transcription factor	No overlap with loaded model regions