ModCRE DB

Transcription factor

Q13886 - KLF9

Krueppel-like factor 9 (Basic transcription element-binding protein 1) (BTE-binding protein 1) (GC-box-binding protein 1) (Transcription factor BTEB1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 244 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA1107.1 Known JASPAR GGCCACACCCACC Direct PWM Open · Scan
MA1107.2 Known JASPAR CAGCCACACCCACCCC Direct PWM Open · Scan
MA1107.3 Known JASPAR GCCACACCCAC Direct PWM Open · Scan
M08088_2.00 Known CisBP GGCCACACCCACC Direct PWM Open · Scan
M08880_2.00 Known CisBP GGCCACGCCCCCTCC Direct PWM Open · Scan
KLF9_HUMAN.H11MO.0.C Known HOCOMOCO GGAGGGGGCGTGGCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 244 aa
137-225

Region 137-225 0 PWM

Residues
89 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 137-2251 model
Actions
Predicted = Low TFS_Q13886:137:225_2i13_A_1 2i13 137-225 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
143-167PF00096Zinc finger, C2H2 typeoverlaps 137-225
173-197PF00096Zinc finger, C2H2 typeoverlaps 137-225
203-225PF00096Zinc finger, C2H2 typeoverlaps 137-225