ModCRE DB

Transcription factor

Q13887 - KLF5

Krueppel-like factor 5 (Basic transcription element-binding protein 2) (BTE-binding protein 2) (Colon krueppel-like factor) (GC-box-binding protein 2) (Intestinal-enriched krueppel-like factor) (Transcription factor BTEB2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 457 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0599.1 Known JASPAR GCCCCGCCCC Direct PWM Open · Scan
M04410_2.00 Known CisBP ACCACGCCCC Direct PWM Open · Scan
M04411_2.00 Known CisBP GCCACGCCCT Direct PWM Open · Scan
M08086_2.00 Known CisBP GCCCCGCCCC Direct PWM Open · Scan
M08868_2.00 Known CisBP CCCAGCCCCACCCT Direct PWM Open · Scan
M09502_2.00 Known CisBP GCCACACCCT Direct PWM Open · Scan
KLF5_HUMAN.H11MO.0.A Known HOCOMOCO AGGGTGGGGCTGGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 457 aa
373-455

Region 373-455 0 PWM

Residues
83 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2WBU
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 373-4551 model
Actions
Predicted = Low TFS_Q13887:373:455_2wbu_A_1 2wbu 373-455 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
373-397PF00096Zinc finger, C2H2 typeoverlaps 373-455
403-427PF00096Zinc finger, C2H2 typeoverlaps 373-455
433-455PF00096Zinc finger, C2H2 typeoverlaps 373-455