ModCRE DB

Transcription factor

Q13952 - NFYC

Nuclear transcription factor Y subunit gamma (CAAT box DNA-binding protein subunit C) (Nuclear transcription factor Y subunit C) (NF-YC) (Transactivator HSM-1/2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 458 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4
MotifPredictionSourceDNA bindingSupportLogoActions
MA1644.1 Known JASPAR AGCCAATCAGA Direct PWM Open · Scan
MA1644.2 Known JASPAR CCAATCA Direct PWM Open · Scan
M09442_2.00 Known CisBP CTAGCCAATCAGAG Direct PWM Open · Scan
NFYC_HUMAN.H11MO.0.A Known HOCOMOCO CTAGCCAATCAGAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 458 aa
15-119

Region 15-119 0 PWM

Residues
105 aa
Domains
PF00125 · Core histone H2A/H2B/H3/H4 domain
3D models
1 active PDB
Templates
4G92
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 15-1191 model
Actions
Predicted = Low TFS_Q13952:15:119_4g92_C_1 4g92 15-119 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
28-105PF00125Core histone H2A/H2B/H3/H4 domainoverlaps 15-119