ModCRE DB

Transcription factor

Q14119 - VEZF1

Vascular endothelial zinc finger 1 (Putative transcription factor DB1) (Zinc finger protein 161)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 521 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA1578.1 Known JASPAR CCCCCCACTT Direct PWM Open · Scan
MA1578.2 Known JASPAR CCCCCC Direct PWM Open · Scan
M01172_2.00 Known CisBP CCCCCCACTT Direct PWM Open · Scan
M08893_2.00 Known CisBP CCCCTCCCCCTCCCCCCTCCCC Direct PWM Open · Scan
VEZF1_HUMAN.H11MO.0.C Known HOCOMOCO GGGGAGGGGGGAGGGGGAGGGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 521 aa
171-283

Region 171-283 0 PWM

Residues
113 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13894 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 171-2831 model
Actions
Predicted = Low TFS_Q14119:171:283_5egb_A_1 5egb 171-283 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
74-93PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
174-196PF00096Zinc finger, C2H2 typeoverlaps 171-283
202-224PF13894C2H2-type zinc fingeroverlaps 171-283
261-283PF00096Zinc finger, C2H2 typeoverlaps 171-283