ModCRE DB

Transcription factor

Q14543

Homeodomain protein (50 AA)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 50 aa

158 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)46
MotifPredictionSourceDNA bindingSupportLogoActions
M00422_2.00 NN 70+% CisBP TTAATGA 98.0% identity Open · Scan
MA0158.1 NN 70+% JASPAR CACTAATT 86.9% identity Open · Scan
MA0904.1 NN 70+% JASPAR ACGGTAATTAGCTCAT 86.9% identity Open · Scan
MA0904.2 NN 70+% JASPAR GTAATTAC 86.9% identity Open · Scan
M00494_2.00 NN 70+% CisBP TTAATTACC 86.3% identity Open · Scan
MA1497.1 NN 70+% JASPAR GGTAATTAAC 86.3% identity Open · Scan
MA1507.1 NN 70+% JASPAR ATCATTAG 86.3% identity Open · Scan
MA1498.1 NN 70+% JASPAR GCAATTAC 86.0% identity Open · Scan
M00392_2.00 NN 70+% CisBP TTAATTAC 84.7% identity Open · Scan
M03799_2.00 NN 70+% CisBP GTAATTAC 84.7% identity Open · Scan
M06549_2.00 NN 70+% CisBP TTAATGA 84.4% identity Open · Scan
MA1496.1 NN 70+% JASPAR GTCATTAG 84.0% identity Open · Scan
M09206_2.00 NN 70+% CisBP CATTAATCAA 83.7% identity Open · Scan
MA1501.1 NN 70+% JASPAR GGTAATTAAC 83.7% identity Open · Scan
M00476_2.00 NN 70+% CisBP TTAATGGCC 82.6% identity Open · Scan
M06261_2.00 NN 70+% CisBP TTAATTA 82.5% identity Open · Scan
M06227_2.00 NN 70+% CisBP TTAATTAT 81.8% identity Open · Scan
M09204_2.00 NN 70+% CisBP TTAATGGC 81.8% identity Open · Scan
MA1499.1 NN 70+% JASPAR ATCATTAG 81.8% identity Open · Scan
MA1504.1 NN 70+% JASPAR GTCATTAA 81.8% identity Open · Scan
M02214_2.00 NN 70+% CisBP AATAATTATA 78.3% identity Open · Scan
M09680_2.00 NN 70+% CisBP TTAATTA 78.0% identity Open · Scan
MA1500.1 NN 70+% JASPAR TTAATTAC 78.0% identity Open · Scan
M00492_2.00 NN 70+% CisBP TAATTAGC 77.5% identity Open · Scan
M05100_2.00 NN 70+% CisBP TTAACGAC 77.5% identity Open · Scan
M00532_2.00 NN 70+% CisBP TTAATGACC 76.7% identity Open · Scan
M06248_2.00 NN 70+% CisBP TAATTGCC 76.0% identity Open · Scan
M06545_2.00 NN 70+% CisBP TTAATTA 75.6% identity Open · Scan
MA0903.1 NN 70+% JASPAR ACTAATTAGC 75.5% identity Open · Scan
MA0912.1 NN 70+% JASPAR TTGAGTTAATTAACCT 75.5% identity Open · Scan
MA0912.2 NN 70+% JASPAR CTAATTAC 75.5% identity Open · Scan
M04904_2.00 NN 70+% CisBP GTAATTAC 73.3% identity Open · Scan
M00403_2.00 NN 70+% CisBP CTAATTACC 72.9% identity Open · Scan
MA0900.1 NN 70+% JASPAR CCTAATTACC 72.9% identity Open · Scan
MA0902.1 NN 70+% JASPAR AGTAATTAAC 72.9% identity Open · Scan
M05057_2.00 NN 70+% CisBP TTAATTAC 72.5% identity Open · Scan
M04959_2.00 NN 70+% CisBP GTAATTAC 72.0% identity Open · Scan
M09196_2.00 NN 70+% CisBP TTGATGGATG 72.0% identity Open · Scan
MA1495.1 NN 70+% JASPAR GTAATTAC 72.0% identity Open · Scan
M00391_2.00 NN 70+% CisBP TTAATTGCC 70.7% identity Open · Scan
M05312_2.00 NN 70+% CisBP TTAACGAC 70.7% identity Open · Scan
MA0910.1 NN 70+% JASPAR TAAATAATTAATGGCTA 70.7% identity Open · Scan
MA0910.2 NN 70+% JASPAR GCAATTAC 70.7% identity Open · Scan
MA1502.1 NN 70+% JASPAR GCAATTAC 70.7% identity Open · Scan
MA1505.1 NN 70+% JASPAR GTAATTAC 70.7% identity Open · Scan
M02166_2.00 NN 70+% CisBP CTAATTAC 70.0% identity Open · Scan
Nearest Neighbor (70% - 40%)112
MotifPredictionSourceDNA bindingSupportLogoActions
M05105_2.00 NN 70-40% CisBP GTCGTAAAAT 68.8% identity Open · Scan
MA0913.1 NN 70-40% JASPAR GCAATAAAAA 68.8% identity Open · Scan
MA0913.2 NN 70-40% JASPAR GCAATAAAAC 68.8% identity Open · Scan
M03104_2.00 NN 70-40% CisBP TTAATTACGGTAATTAC 67.5% identity Open · Scan
M03271_2.00 NN 70-40% CisBP GTAATTAC 67.5% identity Open · Scan
M03832_2.00 NN 70-40% CisBP GGTAATTACC 67.5% identity Open · Scan
M06329_2.00 NN 70-40% CisBP CACTAATTA 67.5% identity Open · Scan
M09193_2.00 NN 70-40% CisBP TTTTATGGCCTT 67.5% identity Open · Scan
MA0661.1 NN 70-40% JASPAR GCTAATTAAC 67.5% identity Open · Scan
MA0706.1 NN 70-40% JASPAR AGTAATTAAC 67.5% identity Open · Scan
MA1473.1 NN 70-40% JASPAR GGCAATAAAAC 67.5% identity Open · Scan
M09582_2.00 NN 70-40% CisBP ATGATTGATG 67.4% identity Open · Scan
M06281_2.00 NN 70-40% CisBP TTAATTA 66.6% identity Open · Scan
MA0132.1 NN 70-40% JASPAR CTAATT 65.8% identity Open · Scan
MA0132.2 NN 70-40% JASPAR GTAATTAG 65.8% identity Open · Scan
M09214_2.00 NN 70-40% CisBP GCATTAATCAA 65.5% identity Open · Scan
MA0485.1 NN 70-40% JASPAR GGCCATAAATCAC 65.2% identity Open · Scan
MA0485.2 NN 70-40% JASPAR GTCGTAAAAT 65.2% identity Open · Scan
M03253_2.00 NN 70-40% CisBP TTTTTATTAC 65.0% identity Open · Scan
M05394_2.00 NN 70-40% CisBP GGTCGTAAAAC 65.0% identity Open · Scan
M09170_2.00 NN 70-40% CisBP TCATAAATCATC 65.0% identity Open · Scan
MA0899.1 NN 70-40% JASPAR GGTAATAAAAA 65.0% identity Open · Scan
MA0905.1 NN 70-40% JASPAR GTCGTAAAAT 65.0% identity Open · Scan
M03276_2.00 NN 70-40% CisBP GCTAATTAGC 64.8% identity Open · Scan
M06264_2.00 NN 70-40% CisBP GCTAATTA 64.8% identity Open · Scan
M10761_2.00 NN 70-40% CisBP CATAAAT 64.8% identity Open · Scan
MA0465.1 NN 70-40% JASPAR AAGCCATAAAA 64.8% identity Open · Scan
MA0642.1 NN 70-40% JASPAR CCCAATTAGC 64.8% identity Open · Scan
M00410_2.00 NN 70-40% CisBP TTTTATGACC 64.5% identity Open · Scan
MA1503.1 NN 70-40% JASPAR GTCGTAAAAT 64.5% identity Open · Scan
M10718_2.00 NN 70-40% CisBP TTTTTAATTGGTT 63.1% identity Open · Scan
M00469_2.00 NN 70-40% CisBP TTAATTACC 62.7% identity Open · Scan
M05272_2.00 NN 70-40% CisBP TTAACGAG 62.7% identity Open · Scan
MA0893.1 NN 70-40% JASPAR ACTAATTAAA 62.7% identity Open · Scan
MA1506.1 NN 70-40% JASPAR GGTCGTAAAAC 62.7% identity Open · Scan
MA0594.1 NN 70-40% JASPAR GCCATAAATCA 62.5% identity Open · Scan
MA0594.2 NN 70-40% JASPAR GTCGTAAACG 62.5% identity Open · Scan
M02150_2.00 NN 70-40% CisBP TTAATTAA 62.2% identity Open · Scan
M03775_2.00 NN 70-40% CisBP GTTTTATGTGTTTT 61.9% identity Open · Scan
M05019_2.00 NN 70-40% CisBP GGTCGTAAAAC 58.3% identity Open · Scan
M09186_2.00 NN 70-40% CisBP ACATAAAT 58.3% identity Open · Scan
MA0878.1 NN 70-40% JASPAR GCAATAAAA 58.3% identity Open · Scan
M02153_2.00 NN 70-40% CisBP GCCCAATAAA 57.5% identity Open · Scan
M02205_2.00 NN 70-40% CisBP CATTAATTACC 56.8% identity Open · Scan
M00508_2.00 NN 70-40% CisBP TTTTATGACC 56.7% identity Open · Scan
M01245_2.00 NN 70-40% CisBP TTTTATTACC 56.7% identity Open · Scan
M06241_2.00 NN 70-40% CisBP CGTTAATTATTT 56.7% identity Open · Scan
MA0887.1 NN 70-40% JASPAR GGTAATTAGC 56.7% identity Open · Scan
MA0888.1 NN 70-40% JASPAR GGTAATTAGC 56.7% identity Open · Scan
MA0906.1 NN 70-40% JASPAR GGTCGTAAAAA 56.7% identity Open · Scan
M02046_2.00 NN 70-40% CisBP TCATTAATTAT 56.0% identity Open · Scan
M02211_2.00 NN 70-40% CisBP TTAATTAC 56.0% identity Open · Scan
M03851_2.00 NN 70-40% CisBP CTAATTGA 56.0% identity Open · Scan
M06238_2.00 NN 70-40% CisBP TCTTAATTAG 56.0% identity Open · Scan
M06224_2.00 NN 70-40% CisBP ATCATAAAA 55.8% identity Open · Scan
M06544_2.00 NN 70-40% CisBP GTAATTA 55.8% identity Open · Scan
M06232_2.00 NN 70-40% CisBP TTAATGA 55.5% identity Open · Scan
M06504_2.00 NN 70-40% CisBP TTAAGTG 55.5% identity Open · Scan
M06900_2.00 NN 70-40% CisBP TCAATAATTAA 55.5% identity Open · Scan
M06912_2.00 NN 70-40% CisBP TCAATAATTGA 55.5% identity Open · Scan
MA0876.1 NN 70-40% JASPAR CCAATTAA 55.5% identity Open · Scan
M00462_2.00 NN 70-40% CisBP CTAATTG 55.0% identity Open · Scan
M06312_2.00 NN 70-40% CisBP TTAATTA 55.0% identity Open · Scan
MA0889.1 NN 70-40% JASPAR ACTAATTAGC 55.0% identity Open · Scan
MA0890.1 NN 70-40% JASPAR ACCAATTAGC 55.0% identity Open · Scan
M00538_2.00 NN 70-40% CisBP TTTTATGACC 54.0% identity Open · Scan
MA0027.1 NN 70-40% JASPAR AAGTAGTGCCC 54.0% identity Open · Scan
MA0027.2 NN 70-40% JASPAR CTAATTAG 54.0% identity Open · Scan
MA0873.1 NN 70-40% JASPAR AGTCGTAAAAA 54.0% identity Open · Scan
MA0908.1 NN 70-40% JASPAR GTCGTAAAAA 54.0% identity Open · Scan
M00424_2.00 NN 70-40% CisBP ACTAATTA 53.8% identity Open · Scan
M03828_2.00 NN 70-40% CisBP GTTAATTAACGTTAATTAAC 53.5% identity Open · Scan
M06326_2.00 NN 70-40% CisBP TTAATT 53.5% identity Open · Scan
M00388_2.00 NN 70-40% CisBP CTAATTGCTT 53.0% identity Open · Scan
MA0707.1 NN 70-40% JASPAR GGTAATTAAA 53.0% identity Open · Scan
M00496_2.00 NN 70-40% CisBP TTAAGTGGTT 52.7% identity Open · Scan
M06286_2.00 NN 70-40% CisBP CTTAAGTG 52.7% identity Open · Scan
M10805_2.00 NN 70-40% CisBP GGACAAATAGCCC 52.7% identity Open · Scan
MA0122.1 NN 70-40% JASPAR TTAAGTGGA 52.7% identity Open · Scan
MA0122.2 NN 70-40% JASPAR ACCACTTAA 52.7% identity Open · Scan
M03798_2.00 NN 70-40% CisBP GGTAATTAGC 52.5% identity Open · Scan
M02231_2.00 NN 70-40% CisBP TTAATTGG 52.0% identity Open · Scan
M06931_2.00 NN 70-40% CisBP GCATTAATTAC 52.0% identity Open · Scan
M01250_2.00 NN 70-40% CisBP TCAATAATTG 51.8% identity Open · Scan
M03076_2.00 NN 70-40% CisBP TTAATTAAATTAA 51.6% identity Open · Scan
M03776_2.00 NN 70-40% CisBP TAATTGAATTA 51.6% identity Open · Scan
M06310_2.00 NN 70-40% CisBP TTAATTA 51.6% identity Open · Scan
M06370_2.00 NN 70-40% CisBP TTAATTA 51.6% identity Open · Scan
MA0874.1 NN 70-40% JASPAR GTCCATTAATTAATGGA 51.6% identity Open · Scan
M00474_2.00 NN 70-40% CisBP TTTATGACC 51.3% identity Open · Scan
M02196_2.00 NN 70-40% CisBP TTAATTAC 51.3% identity Open · Scan
MA0124.1 NN 70-40% JASPAR ATACTTA 51.3% identity Open · Scan
MA0124.2 NN 70-40% JASPAR ACCACTTAA 51.3% identity Open · Scan
MA0709.1 NN 70-40% JASPAR CCAATTAA 51.3% identity Open · Scan
MA0911.1 NN 70-40% JASPAR GGTCGTAAAATT 51.3% identity Open · Scan
M00464_2.00 NN 70-40% CisBP CTAATTACC 51.2% identity Open · Scan
M05392_2.00 NN 70-40% CisBP GTTAAGTGC 51.2% identity Open · Scan
M06554_2.00 NN 70-40% CisBP TTAATTG 51.2% identity Open · Scan
M10754_2.00 NN 70-40% CisBP CAAGTGCGTG 51.2% identity Open · Scan
MA0722.1 NN 70-40% JASPAR CTAATTAC 51.2% identity Open · Scan
MA0723.1 NN 70-40% JASPAR CTAATTAC 51.2% identity Open · Scan
MA0896.1 NN 70-40% JASPAR ACAAGCAATTAATGAAT 51.2% identity Open · Scan
MA0898.1 NN 70-40% JASPAR ACAAGCAATTAAAGAAT 51.2% identity Open · Scan
MA0651.1 NN 70-40% JASPAR GGTCGTAAAAT 51.1% identity Open · Scan
M02078_2.00 NN 70-40% CisBP AATTAATTAGT 50.0% identity Open · Scan
M02165_2.00 NN 70-40% CisBP CTTAATTGG 50.0% identity Open · Scan
M06548_2.00 NN 70-40% CisBP TTAATTG 50.0% identity Open · Scan
M09676_2.00 NN 70-40% CisBP TTAATGA 50.0% identity Open · Scan
MA0063.1 NN 70-40% JASPAR TTAATTG 50.0% identity Open · Scan
MA0063.2 NN 70-40% JASPAR ACCACTCAAAA 50.0% identity Open · Scan
MA0724.1 NN 70-40% JASPAR ACCGATTAG 50.0% identity Open · Scan
MA1481.1 NN 70-40% JASPAR CTAATTAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 50 aa
1-40

Region 1-40 0 PWM

Residues
40 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1B72
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-401 model
Actions
Predicted = Low DIMER_Q14543:1:40_1b72_A_1 1b72 1-40 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-39PF00046Homeodomainoverlaps 1-40