ModCRE DB

Transcription factor

Q14548 - HOX2.8

HOX2.8 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 182 aa

196 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)17
MotifPredictionSourceDNA bindingSupportLogoActions
M00403_2.00 NN 70+% CisBP CTAATTACC 93.3% identity Open · Scan
M06545_2.00 NN 70+% CisBP TTAATTA 92.6% identity Open · Scan
MA0900.1 NN 70+% JASPAR CCTAATTACC 79.6% identity Open · Scan
M00532_2.00 NN 70+% CisBP TTAATGACC 76.9% identity Open · Scan
MA0912.1 NN 70+% JASPAR TTGAGTTAATTAACCT 76.9% identity Open · Scan
MA0912.2 NN 70+% JASPAR CTAATTAC 76.9% identity Open · Scan
M03104_2.00 NN 70+% CisBP TTAATTACGGTAATTAC 74.3% identity Open · Scan
M03271_2.00 NN 70+% CisBP GTAATTAC 74.3% identity Open · Scan
M04959_2.00 NN 70+% CisBP GTAATTAC 74.3% identity Open · Scan
MA0706.1 NN 70+% JASPAR AGTAATTAAC 74.3% identity Open · Scan
MA0903.1 NN 70+% JASPAR ACTAATTAGC 74.3% identity Open · Scan
MA1495.1 NN 70+% JASPAR GTAATTAC 74.3% identity Open · Scan
MA0902.1 NN 70+% JASPAR AGTAATTAAC 72.3% identity Open · Scan
M03832_2.00 NN 70+% CisBP GGTAATTACC 71.7% identity Open · Scan
MA0594.1 NN 70+% JASPAR GCCATAAATCA 71.7% identity Open · Scan
MA0594.2 NN 70+% JASPAR GTCGTAAACG 71.7% identity Open · Scan
MA0661.1 NN 70+% JASPAR GCTAATTAAC 71.7% identity Open · Scan
Nearest Neighbor (70% - 40%)179
MotifPredictionSourceDNA bindingSupportLogoActions
M00410_2.00 NN 70-40% CisBP TTTTATGACC 69.2% identity Open · Scan
MA0485.1 NN 70-40% JASPAR GGCCATAAATCAC 69.2% identity Open · Scan
MA0485.2 NN 70-40% JASPAR GTCGTAAAAT 69.2% identity Open · Scan
MA1496.1 NN 70-40% JASPAR GTCATTAG 69.2% identity Open · Scan
MA1503.1 NN 70-40% JASPAR GTCGTAAAAT 69.2% identity Open · Scan
M06281_2.00 NN 70-40% CisBP TTAATTA 68.2% identity Open · Scan
M00476_2.00 NN 70-40% CisBP TTAATGGCC 67.5% identity Open · Scan
M00494_2.00 NN 70-40% CisBP TTAATTACC 67.5% identity Open · Scan
M03799_2.00 NN 70-40% CisBP GTAATTAC 67.5% identity Open · Scan
M09582_2.00 NN 70-40% CisBP ATGATTGATG 67.5% identity Open · Scan
MA0132.1 NN 70-40% JASPAR CTAATT 67.5% identity Open · Scan
MA0132.2 NN 70-40% JASPAR GTAATTAG 67.5% identity Open · Scan
MA1497.1 NN 70-40% JASPAR GGTAATTAAC 67.5% identity Open · Scan
MA1498.1 NN 70-40% JASPAR GCAATTAC 67.5% identity Open · Scan
M00422_2.00 NN 70-40% CisBP TTAATGA 66.6% identity Open · Scan
M00492_2.00 NN 70-40% CisBP TAATTAGC 66.6% identity Open · Scan
M05100_2.00 NN 70-40% CisBP TTAACGAC 66.6% identity Open · Scan
M06261_2.00 NN 70-40% CisBP TTAATTA 66.6% identity Open · Scan
M06544_2.00 NN 70-40% CisBP GTAATTA 66.6% identity Open · Scan
M09204_2.00 NN 70-40% CisBP TTAATGGC 66.6% identity Open · Scan
MA0158.1 NN 70-40% JASPAR CACTAATT 66.6% identity Open · Scan
MA0904.1 NN 70-40% JASPAR ACGGTAATTAGCTCAT 66.6% identity Open · Scan
MA0904.2 NN 70-40% JASPAR GTAATTAC 66.6% identity Open · Scan
MA1499.1 NN 70-40% JASPAR ATCATTAG 66.6% identity Open · Scan
MA1507.1 NN 70-40% JASPAR ATCATTAG 66.6% identity Open · Scan
M00392_2.00 NN 70-40% CisBP TTAATTAC 65.8% identity Open · Scan
M00391_2.00 NN 70-40% CisBP TTAATTGCC 65.0% identity Open · Scan
M05312_2.00 NN 70-40% CisBP TTAACGAC 65.0% identity Open · Scan
M09206_2.00 NN 70-40% CisBP CATTAATCAA 65.0% identity Open · Scan
MA0910.1 NN 70-40% JASPAR TAAATAATTAATGGCTA 65.0% identity Open · Scan
MA0910.2 NN 70-40% JASPAR GCAATTAC 65.0% identity Open · Scan
MA1501.1 NN 70-40% JASPAR GGTAATTAAC 65.0% identity Open · Scan
MA1502.1 NN 70-40% JASPAR GCAATTAC 65.0% identity Open · Scan
MA1505.1 NN 70-40% JASPAR GTAATTAC 65.0% identity Open · Scan
M02166_2.00 NN 70-40% CisBP CTAATTAC 64.1% identity Open · Scan
M03253_2.00 NN 70-40% CisBP TTTTTATTAC 64.1% identity Open · Scan
M05394_2.00 NN 70-40% CisBP GGTCGTAAAAC 64.1% identity Open · Scan
M06227_2.00 NN 70-40% CisBP TTAATTAT 64.1% identity Open · Scan
M09170_2.00 NN 70-40% CisBP TCATAAATCATC 64.1% identity Open · Scan
MA0899.1 NN 70-40% JASPAR GGTAATAAAAA 64.1% identity Open · Scan
MA0905.1 NN 70-40% JASPAR GTCGTAAAAT 64.1% identity Open · Scan
MA1504.1 NN 70-40% JASPAR GTCATTAA 64.1% identity Open · Scan
MA1506.1 NN 70-40% JASPAR GGTCGTAAAAC 64.1% identity Open · Scan
MA1500.1 NN 70-40% JASPAR TTAATTAC 63.4% identity Open · Scan
M00469_2.00 NN 70-40% CisBP TTAATTACC 62.5% identity Open · Scan
M02214_2.00 NN 70-40% CisBP AATAATTATA 62.5% identity Open · Scan
M05272_2.00 NN 70-40% CisBP TTAACGAG 62.5% identity Open · Scan
M06241_2.00 NN 70-40% CisBP CGTTAATTATTT 62.5% identity Open · Scan
MA0876.1 NN 70-40% JASPAR CCAATTAA 62.5% identity Open · Scan
MA0887.1 NN 70-40% JASPAR GGTAATTAGC 62.5% identity Open · Scan
MA0888.1 NN 70-40% JASPAR GGTAATTAGC 62.5% identity Open · Scan
MA0893.1 NN 70-40% JASPAR ACTAATTAAA 62.5% identity Open · Scan
M00388_2.00 NN 70-40% CisBP CTAATTGCTT 62.2% identity Open · Scan
MA0707.1 NN 70-40% JASPAR GGTAATTAAA 62.2% identity Open · Scan
M09680_2.00 NN 70-40% CisBP TTAATTA 61.9% identity Open · Scan
M05057_2.00 NN 70-40% CisBP TTAATTAC 61.8% identity Open · Scan
M06248_2.00 NN 70-40% CisBP TAATTGCC 61.5% identity Open · Scan
M06329_2.00 NN 70-40% CisBP CACTAATTA 61.5% identity Open · Scan
M06489_2.00 NN 70-40% CisBP TTAATTA 61.1% identity Open · Scan
M05105_2.00 NN 70-40% CisBP GTCGTAAAAT 60.8% identity Open · Scan
MA0913.1 NN 70-40% JASPAR GCAATAAAAA 60.8% identity Open · Scan
MA0913.2 NN 70-40% JASPAR GCAATAAAAC 60.8% identity Open · Scan
M09214_2.00 NN 70-40% CisBP GCATTAATCAA 60.7% identity Open · Scan
M01503_2.00 NN 70-40% CisBP TTAATTAC 60.0% identity Open · Scan
MA0710.1 NN 70-40% JASPAR GCTAATTAGC 60.0% identity Open · Scan
MA0880.1 NN 70-40% JASPAR CCAATTAC 60.0% identity Open · Scan
M03775_2.00 NN 70-40% CisBP GTTTTATGTGTTTT 59.5% identity Open · Scan
M06326_2.00 NN 70-40% CisBP TTAATT 59.3% identity Open · Scan
M02150_2.00 NN 70-40% CisBP TTAATTAA 59.2% identity Open · Scan
M06232_2.00 NN 70-40% CisBP TTAATGA 59.0% identity Open · Scan
M06264_2.00 NN 70-40% CisBP GCTAATTA 58.9% identity Open · Scan
M06504_2.00 NN 70-40% CisBP TTAAGTG 58.9% identity Open · Scan
MA0122.1 NN 70-40% JASPAR TTAAGTGGA 58.9% identity Open · Scan
MA0122.2 NN 70-40% JASPAR ACCACTTAA 58.9% identity Open · Scan
MA0124.1 NN 70-40% JASPAR ATACTTA 58.9% identity Open · Scan
MA0124.2 NN 70-40% JASPAR ACCACTTAA 58.9% identity Open · Scan
M06322_2.00 NN 70-40% CisBP TTAATTA 58.6% identity Open · Scan
MA0681.1 NN 70-40% JASPAR TAATTTAATTA 58.6% identity Open · Scan
MA0713.1 NN 70-40% JASPAR TAATTTAATTA 58.6% identity Open · Scan
M09573_2.00 NN 70-40% CisBP GTTAATGA 58.3% identity Open · Scan
MA0674.1 NN 70-40% JASPAR GTAATTAA 58.3% identity Open · Scan
MA0675.1 NN 70-40% JASPAR CTAATTAA 58.3% identity Open · Scan
M05392_2.00 NN 70-40% CisBP GTTAAGTGC 57.5% identity Open · Scan
M06323_2.00 NN 70-40% CisBP ATTAATTG 57.5% identity Open · Scan
M06548_2.00 NN 70-40% CisBP TTAATTG 57.5% identity Open · Scan
M06554_2.00 NN 70-40% CisBP TTAATTG 57.5% identity Open · Scan
M10754_2.00 NN 70-40% CisBP CAAGTGCGTG 57.5% identity Open · Scan
MA0896.1 NN 70-40% JASPAR ACAAGCAATTAATGAAT 57.5% identity Open · Scan
MA0898.1 NN 70-40% JASPAR ACAAGCAATTAAAGAAT 57.5% identity Open · Scan
M03814_2.00 NN 70-40% CisBP GTAATGGC 57.1% identity Open · Scan
M00462_2.00 NN 70-40% CisBP CTAATTG 56.4% identity Open · Scan
M01245_2.00 NN 70-40% CisBP TTTTATTACC 56.4% identity Open · Scan
M03777_2.00 NN 70-40% CisBP GTAATTGC 56.4% identity Open · Scan
M06312_2.00 NN 70-40% CisBP TTAATTA 56.4% identity Open · Scan
MA0885.1 NN 70-40% JASPAR GCAATTAA 56.4% identity Open · Scan
MA0889.1 NN 70-40% JASPAR ACTAATTAGC 56.4% identity Open · Scan
MA0890.1 NN 70-40% JASPAR ACCAATTAGC 56.4% identity Open · Scan
MA0635.1 NN 70-40% JASPAR GCTAAACGGT 56.0% identity Open · Scan
M02153_2.00 NN 70-40% CisBP GCCCAATAAA 55.5% identity Open · Scan
M02181_2.00 NN 70-40% CisBP TTAAGTGGT 55.5% identity Open · Scan
M06361_2.00 NN 70-40% CisBP TTTAATTA 55.5% identity Open · Scan
M06539_2.00 NN 70-40% CisBP CTAATTA 55.5% identity Open · Scan
M02205_2.00 NN 70-40% CisBP CATTAATTACC 55.0% identity Open · Scan
M03234_2.00 NN 70-40% CisBP TTTTAATTGGT 55.0% identity Open · Scan
MA0897.1 NN 70-40% JASPAR ACAAGCAATTAAAGAAT 55.0% identity Open · Scan
M00497_2.00 NN 70-40% CisBP TTAAGTGGT 54.7% identity Open · Scan
M05042_2.00 NN 70-40% CisBP GTCAAGTGGT 54.7% identity Open · Scan
MA0063.1 NN 70-40% JASPAR TTAATTG 54.7% identity Open · Scan
MA0063.2 NN 70-40% JASPAR ACCACTCAAAA 54.7% identity Open · Scan
MA0672.1 NN 70-40% JASPAR ACCACTTGAA 54.7% identity Open · Scan
M00464_2.00 NN 70-40% CisBP CTAATTACC 54.2% identity Open · Scan
MA0722.1 NN 70-40% JASPAR CTAATTAC 54.2% identity Open · Scan
MA0723.1 NN 70-40% JASPAR CTAATTAC 54.2% identity Open · Scan
M00457_2.00 NN 70-40% CisBP TTAATTGCT 53.8% identity Open · Scan
M00465_2.00 NN 70-40% CisBP TTAATTAG 53.8% identity Open · Scan
M00508_2.00 NN 70-40% CisBP TTTTATGACC 53.8% identity Open · Scan
M00520_2.00 NN 70-40% CisBP CTTAAGTGCT 53.8% identity Open · Scan
M02164_2.00 NN 70-40% CisBP GTAATGGGCT 53.8% identity Open · Scan
M03815_2.00 NN 70-40% CisBP TTAATTAG 53.8% identity Open · Scan
M04906_2.00 NN 70-40% CisBP ATAACGAC 53.8% identity Open · Scan
M05179_2.00 NN 70-40% CisBP ATAATTGC 53.8% identity Open · Scan
M06286_2.00 NN 70-40% CisBP CTTAAGTG 53.8% identity Open · Scan
M06359_2.00 NN 70-40% CisBP TTTAATTA 53.8% identity Open · Scan
M09186_2.00 NN 70-40% CisBP ACATAAAT 53.8% identity Open · Scan
M10761_2.00 NN 70-40% CisBP CATAAAT 53.8% identity Open · Scan
MA0618.1 NN 70-40% JASPAR TTAATTAG 53.8% identity Open · Scan
MA0666.1 NN 70-40% JASPAR CCAATTAG 53.8% identity Open · Scan
MA0673.1 NN 70-40% JASPAR CCACTTGAA 53.8% identity Open · Scan
MA0708.1 NN 70-40% JASPAR CCAATTAA 53.8% identity Open · Scan
MA0709.1 NN 70-40% JASPAR CCAATTAA 53.8% identity Open · Scan
MA0879.1 NN 70-40% JASPAR CCTAATTATC 53.8% identity Open · Scan
MA0882.1 NN 70-40% JASPAR CCAATTAC 53.8% identity Open · Scan
MA0906.1 NN 70-40% JASPAR GGTCGTAAAAA 53.8% identity Open · Scan
MA0908.1 NN 70-40% JASPAR GTCGTAAAAA 53.8% identity Open · Scan
MA1471.1 NN 70-40% JASPAR AAAAACCATTAC 53.8% identity Open · Scan
M03810_2.00 NN 70-40% CisBP GCTAAACGGT 53.6% identity Open · Scan
M02211_2.00 NN 70-40% CisBP TTAATTAC 53.3% identity Open · Scan
M09676_2.00 NN 70-40% CisBP TTAATGA 53.3% identity Open · Scan
M00451_2.00 NN 70-40% CisBP ATTAATTA 52.7% identity Open · Scan
M01244_2.00 NN 70-40% CisBP ATTAATTAC 52.7% identity Open · Scan
M02128_2.00 NN 70-40% CisBP ATTAATTA 52.7% identity Open · Scan
M02142_2.00 NN 70-40% CisBP AATCGATC 52.7% identity Open · Scan
M02165_2.00 NN 70-40% CisBP CTTAATTGG 52.7% identity Open · Scan
M02187_2.00 NN 70-40% CisBP AGTAATTACT 52.7% identity Open · Scan
M06224_2.00 NN 70-40% CisBP ATCATAAAA 52.7% identity Open · Scan
M00385_2.00 NN 70-40% CisBP TTAAGTGG 52.5% identity Open · Scan
M02106_2.00 NN 70-40% CisBP ATATTAATTGGTT 52.5% identity Open · Scan
M03798_2.00 NN 70-40% CisBP GGTAATTAGC 52.5% identity Open · Scan
M09146_2.00 NN 70-40% CisBP CTTGAGTGGC 52.5% identity Open · Scan
M00496_2.00 NN 70-40% CisBP TTAAGTGGTT 52.3% identity Open · Scan
M06549_2.00 NN 70-40% CisBP TTAATGA 52.3% identity Open · Scan
MA0724.1 NN 70-40% JASPAR ACCGATTAG 52.3% identity Open · Scan
M06339_2.00 NN 70-40% CisBP TTTAATTGG 52.2% identity Open · Scan
MA0877.1 NN 70-40% JASPAR GCTAATTGCT 52.0% identity Open · Scan
MA0877.2 NN 70-40% JASPAR CTAAACGG 52.0% identity Open · Scan
M00438_2.00 NN 70-40% CisBP TTTAAGTGC 51.2% identity Open · Scan
M00474_2.00 NN 70-40% CisBP TTTATGACC 51.2% identity Open · Scan
M00526_2.00 NN 70-40% CisBP ATTAATTA 51.2% identity Open · Scan
M02107_2.00 NN 70-40% CisBP TTAATTGCT 51.2% identity Open · Scan
M02196_2.00 NN 70-40% CisBP TTAATTAC 51.2% identity Open · Scan
M05003_2.00 NN 70-40% CisBP ATAACGAC 51.2% identity Open · Scan
M06290_2.00 NN 70-40% CisBP TTTAATTA 51.2% identity Open · Scan
M06378_2.00 NN 70-40% CisBP GCTCAAGTGC 51.2% identity Open · Scan
M09181_2.00 NN 70-40% CisBP TTTAATTGTTTT 51.2% identity Open · Scan
MA0119.1 NN 70-40% JASPAR TGGCACCATGCCAA 51.2% identity Open · Scan
MA0699.1 NN 70-40% JASPAR GCCAATTAGC 51.2% identity Open · Scan
MA0873.1 NN 70-40% JASPAR AGTCGTAAAAA 51.2% identity Open · Scan
MA0875.1 NN 70-40% JASPAR GCAATTAG 51.2% identity Open · Scan
MA0881.1 NN 70-40% JASPAR CCAATTAC 51.2% identity Open · Scan
MA0911.1 NN 70-40% JASPAR GGTCGTAAAATT 51.2% identity Open · Scan
MA1473.1 NN 70-40% JASPAR GGCAATAAAAC 51.2% identity Open · Scan
MA1577.1 NN 70-40% JASPAR CTAATTAG 51.2% identity Open · Scan
MA1645.1 NN 70-40% JASPAR TAACCACTCAAGAA 51.2% identity Open · Scan
M10805_2.00 NN 70-40% CisBP GGACAAATAGCCC 51.0% identity Open · Scan
M00538_2.00 NN 70-40% CisBP TTTTATGACC 50.0% identity Open · Scan
M03152_2.00 NN 70-40% CisBP TAATTAGCTAATTA 50.0% identity Open · Scan
MA0612.1 NN 70-40% JASPAR CCTAATTACC 50.0% identity Open · Scan
MA0651.1 NN 70-40% JASPAR GGTCGTAAAAT 50.0% identity Open · Scan
MA0886.1 NN 70-40% JASPAR GCTAATTAGC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 182 aa
76-114

Region 76-114 0 PWM

Residues
39 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJS
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 76-1141 model
Actions
Predicted = Low DIMER_Q14548:76:114_5zjs_A_1 5zjs 76-114 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
76-114PF00046Homeodomainoverlaps 76-114