Region 1-366 0 PWM
- Residues
- 366 aa
- Domains
- PF09271 · LAG1, DNA binding PF09270 · Beta-trefoil DNA-binding domain PF20144 · TIG domain
- 3D models
- 1 active PDB
- Templates
- 4J2X
- Sources
- Structure model
Transcription factor
H-2K binding factor-2
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 420 aa
Only entries with a generated matrix are shown here.
No generated PWM in this category.
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M08105_2.00 | NN 70+% | CisBP | CTTTCCCAGG | 88.5% identity | Open · Scan | |
| MA1116.1 | NN 70+% | JASPAR | CCTGGGAAAG | 87.0% identity | Open · Scan | |
| M10415_2.00 | NN 70+% | CisBP | CGGTTCCCACAAT | 74.8% identity | Open · Scan |
No generated PWM in this category.
No generated PWM in this category.
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_Q14663:1:366_4j2x_A_1 | 4j2x | 1-366 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 16-99 | PF09271 | LAG1, DNA binding | overlaps 1-366 |
| 127-248 | PF09270 | Beta-trefoil DNA-binding domain | overlaps 1-366 |
| 274-364 | PF20144 | TIG domain | overlaps 1-366 |