Region 223-333 0 PWM
- Residues
- 111 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 5EGB
- Sources
- Structure model
Transcription factor
Q147U1 - ZNF846
Zinc finger protein 846
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 533 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M07707_2.00 | Known | CisBP | TCCCGC | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
533 aa
223-333
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 223-3331 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_Q147U1:223:333_5egb_A_1 | 5egb | 223-333 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 7-47 | PF01352 | KRAB box | No overlap with loaded model regions |
| 199-220 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 226-248 | PF00096 | Zinc finger, C2H2 type | overlaps 223-333 |
| 254-276 | PF00096 | Zinc finger, C2H2 type | overlaps 223-333 |
| 282-304 | PF00096 | Zinc finger, C2H2 type | overlaps 223-333 |
| 310-332 | PF00096 | Zinc finger, C2H2 type | overlaps 223-333 |
| 338-360 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 381-405 | PF13465 | Zinc-finger double domain | No overlap with loaded model regions |
| 408-433 | PF13465 | Zinc-finger double domain | No overlap with loaded model regions |
| 464-489 | PF13465 | Zinc-finger double domain | No overlap with loaded model regions |
| 506-527 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |