ModCRE DB

Transcription factor

Q14814 - MEF2D

Myocyte-specific enhancer factor 2D

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 521 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0773.1 Known JASPAR ACTATAAATAGA Direct PWM Open · Scan
M03343_2.00 Known CisBP ACTATAAATAGA Direct PWM Open · Scan
M05555_2.00 Known CisBP CCAAATTTGG Direct PWM Open · Scan
M05556_2.00 Known CisBP CCAAATTTGG Direct PWM Open · Scan
M09250_2.00 Known CisBP CTAAAAATAGCA Direct PWM Open · Scan
MEF2D_HUMAN.H11MO.0.A Known HOCOMOCO TGCTATTTTTAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 521 aa
2-72

Region 2-72 0 PWM

Residues
71 aa
Domains
PF00319 · SRF-type transcription factor (DNA-binding and dimerisation domain)
3D models
1 active PDB
Templates
3MU6
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 2-721 model
Actions
Predicted = Low DIMER_Q14814:2:72_3mu6_B_1 3mu6 2-72 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
10-57PF00319SRF-type transcription factor (DNA-binding and dimerisation domain)overlaps 2-72
95-153PF12347Holliday junction regulator protein family C-terminal repeatNo overlap with loaded model regions