ModCRE DB

Transcription factor

Q14863 - POU6F1

POU domain, class 6, transcription factor 1 (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5) (mPOU homeobox protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 611 aa

14 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known14
MotifPredictionSourceDNA bindingSupportLogoActions
MA0628.1 Known JASPAR ATTAATTAAT Direct PWM Open · Scan
MA0628.2 Known JASPAR TAATTA Direct PWM Open · Scan
MA1549.1 Known JASPAR ATAATGAGGT Direct PWM Open · Scan
MA1549.2 Known JASPAR TAATGAG Direct PWM Open · Scan
M02094_2.00 Known CisBP ATTAATTAAT Direct PWM Open · Scan
M05349_2.00 Known CisBP CATTATGCGGAGCATAATG Direct PWM Open · Scan
M05350_2.00 Known CisBP ATAATGAGATGCAC Direct PWM Open · Scan
M05351_2.00 Known CisBP ATAATGAGGT Direct PWM Open · Scan
M05352_2.00 Known CisBP TATGCAAAGCATA Direct PWM Open · Scan
M05353_2.00 Known CisBP ATAATGATATGCGT Direct PWM Open · Scan
M05354_2.00 Known CisBP TTAATGAGAT Direct PWM Open · Scan
M05355_2.00 Known CisBP TTATGTTAATGAGG Direct PWM Open · Scan
M05356_2.00 Known CisBP TAATGAGGTGTAATGA Direct PWM Open · Scan
M10746_2.00 Known CisBP GCATAATTTAT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 611 aa
450-600

Region 450-600 0 PWM

Residues
151 aa
Domains
PF00157 · Pou domain - N-terminal to homeobox domain PF00046 · Homeodomain
3D models
1 active PDB
Templates
5WC9
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 450-6001 model
Actions
Predicted = Low DIMER_Q14863:450:600_5wc9_A_1 5wc9 450-600 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
453-523PF00157Pou domain - N-terminal to homeobox domainoverlaps 450-600
545-600PF00046Homeodomainoverlaps 450-600