ModCRE DB

Transcription factor

Q15583 - TGIF1

Homeobox protein TGIF1 (5'-TG-3'-interacting factor 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 401 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0796.1 Known JASPAR TGACAGCTGTCA Direct PWM Open · Scan
M03223_2.00 Known CisBP TGACAGCTGTCA Direct PWM Open · Scan
M05317_2.00 Known CisBP TGACAGCTGTCA Direct PWM Open · Scan
M05318_2.00 Known CisBP TGACAGCTGTCA Direct PWM Open · Scan
M09159_2.00 Known CisBP TGACAGC Direct PWM Open · Scan
M10740_2.00 Known CisBP TACTGACAGCT Direct PWM Open · Scan
TGIF1_HUMAN.H11MO.0.A Known HOCOMOCO TGACAGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 401 aa
162-221

Region 162-221 0 PWM

Residues
60 aa
Domains
PF05920 · Homeobox KN domain
3D models
1 active PDB
Templates
1MNM
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 162-2211 model
Actions
Predicted = Low DIMER_Q15583:162:221_1mnm_D_1 1mnm 162-221 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
182-221PF05920Homeobox KN domainoverlaps 162-221