ModCRE DB

Transcription factor

Q15672 - TWIST1

Twist-related protein 1 (Class A basic helix-loop-helix protein 38) (bHLHa38) (H-twist)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 202 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA1123.1 Known JASPAR ATTCCAGATGTTT Direct PWM Open · Scan
MA1123.2 Known JASPAR ATTCCAGATGTTT Direct PWM Open · Scan
MA1123.3 Known JASPAR CCAGATGT Direct PWM Open · Scan
M08052_2.00 Known CisBP ATTCCAGATGTTT Direct PWM Open · Scan
M08722_2.00 Known CisBP TAATTAAAACCAGATGT Direct PWM Open · Scan
TWST1_HUMAN.H11MO.0.A Known HOCOMOCO ACATCTGGTTTTAATTA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 202 aa
105-156

Region 105-156 0 PWM

Residues
52 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
5I50
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 105-1561 model
Actions
Predicted = Low DIMER_Q15672:105:156_5i50_B_1 5i50 105-156 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
109-159PF00010Helix-loop-helix DNA-binding domainoverlaps 105-156