ModCRE DB

Transcription factor

Q15699 - ALX1

ALX homeobox protein 1 (Cartilage homeoprotein 1) (CART-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 326 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
M10741_2.00 Known CisBP AACTAATTACCATTATCG Direct PWM Open · Scan
M03226_2.00 Known CisBP TTAATTAAATTAA Direct PWM Open · Scan
M05327_2.00 Known CisBP TAATCTAATTA Direct PWM Open · Scan
M05328_2.00 Known CisBP TAATCTAATTA Direct PWM Open · Scan
M09160_2.00 Known CisBP ATAATTGAATTA Direct PWM Open · Scan
ALX1_HUMAN.H11MO.0.B Known HOCOMOCO ATAATTGAATTA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 326 aa
131-190

Region 131-190 0 PWM

Residues
60 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 131-1901 model
Actions
Predicted = Low DIMER_Q15699:131:190_1fjl_A_1 1fjl 131-190 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
133-189PF00046Homeodomainoverlaps 131-190
302-320PF03826OAR motifNo overlap with loaded model regions