ModCRE DB

Transcription factor

Q15853 - USF2

Upstream stimulatory factor 2 (Class B basic helix-loop-helix protein 12) (bHLHb12) (FOS-interacting protein) (FIP) (Major late transcription factor 2) (Upstream transcription factor 2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 346 aa

15 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known15
MotifPredictionSourceDNA bindingSupportLogoActions
MA0526.1 Known JASPAR GTCATGTGACC Direct PWM Open · Scan
MA0526.2 Known JASPAR CGGGGTCACGTGGCCC Direct PWM Open · Scan
MA0526.3 Known JASPAR TGGTCATGTGACCT Direct PWM Open · Scan
MA0526.4 Known JASPAR GGTCACGTGACC Direct PWM Open · Scan
MA0526.5 Known JASPAR GTCACGTGAC Direct PWM Open · Scan
M04076_2.00 Known CisBP CCCACGTGACC Direct PWM Open · Scan
M04077_2.00 Known CisBP ACCATGTGACC Direct PWM Open · Scan
M07785_2.00 Known CisBP GGTCACGTGGCCCGG Direct PWM Open · Scan
M07786_2.00 Known CisBP GGGTCACGTGACCGCG Direct PWM Open · Scan
M07787_2.00 Known CisBP GGTCACGTGAC Direct PWM Open · Scan
M07788_2.00 Known CisBP GGTCACGTGACCC Direct PWM Open · Scan
M07789_2.00 Known CisBP GGTCACGTGACCC Direct PWM Open · Scan
M08050_2.00 Known CisBP GGGCCACGTGACCCCG Direct PWM Open · Scan
M08715_2.00 Known CisBP GGGTCACGTGGCCGCGGCG Direct PWM Open · Scan
USF2_HUMAN.H11MO.0.A Known HOCOMOCO GGGTCACGTGGCCGCGGCG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 346 aa
226-306

Region 226-306 0 PWM

Residues
81 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1HLO
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 226-3061 model
Actions
Predicted = Low DIMER_Q15853:226:306_1hlo_A_1 1hlo 226-306 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
236-291PF00010Helix-loop-helix DNA-binding domainoverlaps 226-306