ModCRE DB

Transcription factor

Q15915 - ZIC1

Zinc finger protein ZIC 1 (Zinc finger protein 201) (Zinc finger protein of the cerebellum 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 447 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA0696.1 Known JASPAR GACCCCCCGCTGTG Direct PWM Open · Scan
M02893_2.00 Known CisBP GACCCCCCGCTGTG Direct PWM Open · Scan
M04485_2.00 Known CisBP GACCCCCCGCTGCGC Direct PWM Open · Scan
M04486_2.00 Known CisBP GACCCCCTGCTGTGC Direct PWM Open · Scan
M04487_2.00 Known CisBP GACCCCCCGCTGTGC Direct PWM Open · Scan
M04488_2.00 Known CisBP GACCCCCTGCTGTGC Direct PWM Open · Scan
M08900_2.00 Known CisBP GACCACCCC Direct PWM Open · Scan
M10226_2.00 Known CisBP GACCACCCA Direct PWM Open · Scan
ZIC1_HUMAN.H11MO.0.B Known HOCOMOCO GGGGTGGTC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 447 aa
242-382

Region 242-382 0 PWM

Residues
141 aa
Domains
PF18366 · Zic proteins zinc finger domain PF23561 · C2H2 zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2GLI
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 242-3821 model
Actions
Predicted = Low TFS_Q15915:242:382_2gli_A_1 2gli 242-382 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
218-264PF18366Zic proteins zinc finger domainoverlaps 242-382
271-300PF23561C2H2 zinc fingeroverlaps 242-382
302-326PF00096Zinc finger, C2H2 typeoverlaps 242-382
332-356PF00096Zinc finger, C2H2 typeoverlaps 242-382
362-384PF00096Zinc finger, C2H2 typeoverlaps 242-382