ModCRE DB

Transcription factor

Q15917

Zinc finger protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 622 aa

56 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07684_2.00 NN 70+% CisBP CCTGTTCTTGACTTT 96.4% identity Open · Scan
Nearest Neighbor (70% - 40%)55
MotifPredictionSourceDNA bindingSupportLogoActions
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 64.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 62.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 61.9% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 59.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 59.0% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 58.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 56.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 56.4% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 55.2% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 55.1% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 55.1% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 55.1% identity Open · Scan
M08889_2.00 NN 70-40% CisBP GCTGCTCTTTTT 55.1% identity Open · Scan
MA1653.1 NN 70-40% JASPAR CCCCCCTCCCCC 55.1% identity Open · Scan
M01457_2.00 NN 70-40% CisBP GCGCACGGAC 54.8% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.1% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 53.7% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 53.6% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 53.5% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.4% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 53.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.8% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 52.7% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 52.7% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 52.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.4% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 52.4% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 51.8% identity Open · Scan
MA0744.1 NN 70-40% JASPAR ATGCAACAGGTGG 51.8% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 51.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.4% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 51.2% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 50.7% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 50.5% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 50.1% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M03677_2.00 NN 70-40% CisBP TGCTACCGTGTTACGCA 50.0% identity Open · Scan
M06050_2.00 NN 70-40% CisBP CACCTGT 50.0% identity Open · Scan
M06051_2.00 NN 70-40% CisBP CACCTGC 50.0% identity Open · Scan
M06088_2.00 NN 70-40% CisBP GCTACTGGGTTTA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 622 aa
1-109

Region 1-109 0 PWM

Residues
109 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-1091 model
Actions
Predicted = Low TFS_Q15917:1:109_5egb_A_1 5egb 1-109 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-25PF00096Zinc finger, C2H2 typeoverlaps 1-109
31-53PF00096Zinc finger, C2H2 typeoverlaps 1-109
59-81PF00096Zinc finger, C2H2 typeoverlaps 1-109
87-109PF00096Zinc finger, C2H2 typeoverlaps 1-109
115-137PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
143-165PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
171-193PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
228-250PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
256-278PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
284-306PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
312-334PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
368-390PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
396-418PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
424-446PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
452-474PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
494-519PF13465Zinc-finger double domainNo overlap with loaded model regions
536-558PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
566-586PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions