ModCRE DB

Transcription factor

Q15924 - ZNF

DNA-binding protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 55 aa

174 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M02896_2.00 NN 70+% CisBP TGCTTTCTAGGAATTCA 91.6% identity Open · Scan
MA0731.1 NN 70+% JASPAR TGCTTTCTAGGAATTCA 91.6% identity Open · Scan
Nearest Neighbor (70% - 40%)172
MotifPredictionSourceDNA bindingSupportLogoActions
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 64.2% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 64.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 64.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.9% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 61.5% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 60.4% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 60.4% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 60.4% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 60.4% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 60.4% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 59.5% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 59.5% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 59.5% identity Open · Scan
M00135_2.00 NN 70-40% CisBP AGCCCCCCAA 58.9% identity Open · Scan
M02938_2.00 NN 70-40% CisBP ATTAACCCTTTCT 58.9% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 58.9% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 58.9% identity Open · Scan
MA0694.1 NN 70-40% JASPAR GCGACCACCGAA 58.9% identity Open · Scan
MA0695.1 NN 70-40% JASPAR GCGACCACCGAA 58.9% identity Open · Scan
MA1657.1 NN 70-40% JASPAR GAAAGAGTTAAA 58.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 58.3% identity Open · Scan
M02731_2.00 NN 70-40% CisBP CACTTTCACTTT 58.3% identity Open · Scan
M03692_2.00 NN 70-40% CisBP TTCACTTTCACTT 58.3% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 58.3% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 58.3% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 58.3% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 58.3% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 58.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 58.3% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 58.3% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 58.3% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 58.3% identity Open · Scan
MA0508.1 NN 70-40% JASPAR AGAAAGTGAAAGTGA 58.3% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 58.3% identity Open · Scan
M00143_2.00 NN 70-40% CisBP CCCCCCCACG 58.1% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 58.1% identity Open · Scan
M03701_2.00 NN 70-40% CisBP ATTACAACAACAACC 57.1% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 57.1% identity Open · Scan
M08239_2.00 NN 70-40% CisBP GGGCCGCTCTAGGCTGCCGG 57.1% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 56.8% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 56.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 56.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 56.4% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 56.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 56.4% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 56.4% identity Open · Scan
M08275_2.00 NN 70-40% CisBP CGCTCCCGGGCCCCC 56.4% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 56.2% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 56.2% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 56.2% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 56.2% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 56.2% identity Open · Scan
M08195_2.00 NN 70-40% CisBP CACTTTCACT 56.2% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 56.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 56.2% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 56.2% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 56.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 56.2% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 56.2% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 56.2% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 56.2% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.2% identity Open · Scan
MA1155.1 NN 70-40% JASPAR TGCACACACTGAAAA 56.2% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 56.2% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 56.2% identity Open · Scan
MA1652.1 NN 70-40% JASPAR GGAGGAGGTGAGAA 56.2% identity Open · Scan
M06120_2.00 NN 70-40% CisBP TCATTCACA 56.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 55.8% identity Open · Scan
MA1653.1 NN 70-40% JASPAR CCCCCCTCCCCC 55.8% identity Open · Scan
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 55.5% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 55.1% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 55.1% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 54.8% identity Open · Scan
M01875_2.00 NN 70-40% CisBP CTGCGCCACA 54.7% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 54.7% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 54.7% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 54.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.5% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 54.5% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 54.5% identity Open · Scan
M07674_2.00 NN 70-40% CisBP AAATCCTTGACAATCAAGGGTTCCCTCAC 54.2% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 54.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.1% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 54.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 54.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 54.1% identity Open · Scan
M03702_2.00 NN 70-40% CisBP GACCCCCCACGACGC 54.1% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 54.1% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 54.1% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 54.1% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 54.1% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 54.1% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 54.1% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 54.1% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 54.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.1% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 54.1% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 54.1% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 54.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 54.1% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 54.1% identity Open · Scan
MA0748.1 NN 70-40% JASPAR GTCCGCCATTA 54.0% identity Open · Scan
M00129_2.00 NN 70-40% CisBP AGACCCCCCAC 53.8% identity Open · Scan
MA0736.1 NN 70-40% JASPAR GACCCCCCGCGAAG 53.8% identity Open · Scan
M00780_2.00 NN 70-40% CisBP GACCCCCCGG 53.6% identity Open · Scan
M08233_2.00 NN 70-40% CisBP CCCCTGCTGGG 53.6% identity Open · Scan
M09013_2.00 NN 70-40% CisBP GGCCCCCTGCTGTGA 53.6% identity Open · Scan
MA0696.1 NN 70-40% JASPAR GACCCCCCGCTGTG 53.6% identity Open · Scan
MA0697.1 NN 70-40% JASPAR GACCCCCCGCTGCGC 53.6% identity Open · Scan
MA0751.1 NN 70-40% JASPAR GACCCCCCGCTGTGC 53.6% identity Open · Scan
MA1584.1 NN 70-40% JASPAR CGACCCCCCGCTGTGC 53.6% identity Open · Scan
MA1628.1 NN 70-40% JASPAR CACAGCAGGGG 53.6% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.4% identity Open · Scan
MA0146.1 NN 70-40% JASPAR GGGGCCGAGGCCTG 53.4% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 52.3% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 52.3% identity Open · Scan
M04587_2.00 NN 70-40% CisBP GTACCTACCGC 52.3% identity Open · Scan
M06119_2.00 NN 70-40% CisBP TACCCTGTA 52.3% identity Open · Scan
M08977_2.00 NN 70-40% CisBP AAATCACAGC 52.3% identity Open · Scan
MA0038.1 NN 70-40% JASPAR CAAATCACTG 52.3% identity Open · Scan
MA0038.2 NN 70-40% JASPAR CAAATCACTGCA 52.3% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 52.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 52.0% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 52.0% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.0% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 52.0% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.0% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 52.0% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 52.0% identity Open · Scan
M07703_2.00 NN 70-40% CisBP CCGACGG 52.0% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 52.0% identity Open · Scan
M08358_2.00 NN 70-40% CisBP CCCTCCCCCTCC 52.0% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 52.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.0% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 52.0% identity Open · Scan
MA0095.1 NN 70-40% JASPAR GCCATC 52.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 52.0% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 52.0% identity Open · Scan
M01186_2.00 NN 70-40% CisBP TACCCCGCAC 51.6% identity Open · Scan
M01199_2.00 NN 70-40% CisBP GCGCCACC 51.5% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 51.4% identity Open · Scan
M04509_2.00 NN 70-40% CisBP GCCCCTCCCCCA 51.1% identity Open · Scan
MA1630.1 NN 70-40% JASPAR GGTGGGGGAGG 51.1% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 51.0% identity Open · Scan
M00147_2.00 NN 70-40% CisBP TGTGTGCAC 50.0% identity Open · Scan
M00250_2.00 NN 70-40% CisBP AATGCTAACT 50.0% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 50.0% identity Open · Scan
M06053_2.00 NN 70-40% CisBP GAAGCCATAACGGC 50.0% identity Open · Scan
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 50.0% identity Open · Scan
M06131_2.00 NN 70-40% CisBP ATGTCAAGCCCAAACAAAACCAAAA 50.0% identity Open · Scan
M07842_2.00 NN 70-40% CisBP CTCACCTG 50.0% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 50.0% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.0% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 50.0% identity Open · Scan
M10203_2.00 NN 70-40% CisBP CCCCAAACCACCCC 50.0% identity Open · Scan
MA0073.1 NN 70-40% JASPAR CCCCAAACCACCCCCCCCCA 50.0% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 50.0% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 50.0% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 50.0% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 50.0% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 50.0% identity Open · Scan
MA0732.1 NN 70-40% JASPAR CTACGCCCACGCACT 50.0% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 50.0% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 55 aa
8-55

Region 8-55 0 PWM

Residues
48 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1A1J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 8-551 model
Actions
Predicted = Low TFS_Q15924:8:55_1a1j_A_1 1a1j 8-55 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
27-49PF00096Zinc finger, C2H2 typeoverlaps 8-55