ModCRE DB

Transcription factor

Q15927 - ZNF

DNA-binding protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 52 aa

91 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M07731_2.00 NN 70+% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 82.9% identity Open · Scan
M07717_2.00 NN 70+% CisBP GGCTCCGCCCCC 75.5% identity Open · Scan
M07659_2.00 NN 70+% CisBP GTCTTCCAAGTAGCTGGTGTT 70.4% identity Open · Scan
Nearest Neighbor (70% - 40%)88
MotifPredictionSourceDNA bindingSupportLogoActions
M07770_2.00 NN 70-40% CisBP CTTGGACTT 64.4% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 63.6% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 60.8% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 60.0% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 60.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 59.0% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 58.6% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 57.7% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 57.7% identity Open · Scan
M08365_2.00 NN 70-40% CisBP GCCAGCAGCCATCAG 57.7% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 57.7% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 57.1% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 56.5% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 55.5% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.5% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 55.5% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 55.5% identity Open · Scan
M04480_2.00 NN 70-40% CisBP ATTGATTACCCACCCTAC 55.5% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 55.5% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 55.5% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.5% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.5% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 55.5% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 55.5% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 55.1% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 54.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 54.5% identity Open · Scan
M03691_2.00 NN 70-40% CisBP ATGCAACAGGTGG 54.5% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 54.5% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 54.5% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 54.5% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 54.5% identity Open · Scan
MA0163.1 NN 70-40% JASPAR GGGGCCCAAGGGGG 54.3% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 54.1% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 54.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 53.7% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.3% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 53.3% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 53.3% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 53.3% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.3% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 53.3% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 52.7% identity Open · Scan
M08089_2.00 NN 70-40% CisBP GGTGCCCCCTGGTG 52.5% identity Open · Scan
MA1102.1 NN 70-40% JASPAR CACCAGGGGGCACC 52.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.3% identity Open · Scan
M00618_2.00 NN 70-40% CisBP TGCTACCGT 52.2% identity Open · Scan
M06058_2.00 NN 70-40% CisBP CTGCTACTGTT 52.2% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 52.2% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.2% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 52.1% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 52.0% identity Open · Scan
M00613_2.00 NN 70-40% CisBP TTTTTTTC 51.2% identity Open · Scan
M08275_2.00 NN 70-40% CisBP CGCTCCCGGGCCCCC 51.2% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.1% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.1% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 51.1% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 51.1% identity Open · Scan
M07750_2.00 NN 70-40% CisBP CTTCTGACACCA 51.1% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 51.1% identity Open · Scan
MA1548.1 NN 70-40% JASPAR TGGGCCCCCT 51.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 51.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.0% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 51.0% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 50.9% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 50.9% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 50.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 50.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 50.9% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 50.9% identity Open · Scan
M00132_2.00 NN 70-40% CisBP TGCTACCGTT 50.0% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.0% identity Open · Scan
M00641_2.00 NN 70-40% CisBP ATTGACCACT 50.0% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.0% identity Open · Scan
M01174_2.00 NN 70-40% CisBP GCTACCGT 50.0% identity Open · Scan
M01439_2.00 NN 70-40% CisBP TTACGCCACA 50.0% identity Open · Scan
M03677_2.00 NN 70-40% CisBP TGCTACCGTGTTACGCA 50.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 50.0% identity Open · Scan
M06088_2.00 NN 70-40% CisBP GCTACTGGGTTTA 50.0% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 50.0% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 50.0% identity Open · Scan
M08966_2.00 NN 70-40% CisBP CCAGCGCCCCCTGGTGGCCA 50.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 50.0% identity Open · Scan
MA0139.1 NN 70-40% JASPAR TGGCCACCAGGGGGCGCTA 50.0% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 50.0% identity Open · Scan
MA1542.1 NN 70-40% JASPAR TGCTACTGTT 50.0% identity Open · Scan
MA1646.1 NN 70-40% JASPAR AAACAGAAGCAG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 52 aa
1-45

Region 1-45 0 PWM

Residues
45 aa
Domains
PF13894 · C2H2-type zinc finger
3D models
1 active PDB
Templates
2KMK
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-451 model
Actions
Predicted = Low TFS_Q15927:1:45_2kmk_A_1 2kmk 1-45 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-30PF13894C2H2-type zinc fingeroverlaps 1-45