ModCRE DB

Transcription factor

Q15930 - ZNF

DNA-binding protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 87 aa

79 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07731_2.00 NN 70+% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 97.6% identity Open · Scan
Nearest Neighbor (70% - 40%)78
MotifPredictionSourceDNA bindingSupportLogoActions
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 69.1% identity Open · Scan
M03583_2.00 NN 70-40% CisBP GGATGCTGTG 66.6% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.6% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 61.2% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 61.0% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 60.2% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 58.5% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 58.3% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 58.3% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 57.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 56.6% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 56.6% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 55.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 54.9% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 54.9% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 54.9% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 54.9% identity Open · Scan
M08365_2.00 NN 70-40% CisBP GCCAGCAGCCATCAG 54.7% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 54.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 54.1% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 54.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 54.0% identity Open · Scan
M07595_2.00 NN 70-40% CisBP GCCTGTTCCTCTCCC 53.9% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 53.6% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 53.6% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 53.6% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.6% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 53.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 53.5% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 53.1% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 53.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.0% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 53.0% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 53.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 52.4% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 52.4% identity Open · Scan
M04480_2.00 NN 70-40% CisBP ATTGATTACCCACCCTAC 52.3% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 52.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 52.1% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 51.8% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 51.8% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 51.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 51.8% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 51.8% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 51.8% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 51.2% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 51.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 51.2% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 51.2% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 50.6% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.6% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 50.6% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 50.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 50.6% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 50.6% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.6% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 50.6% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 50.6% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 50.6% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.6% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 50.6% identity Open · Scan
M00132_2.00 NN 70-40% CisBP TGCTACCGTT 50.0% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 50.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.0% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.0% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.0% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 50.0% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 50.0% identity Open · Scan
M08541_2.00 NN 70-40% CisBP CTAAGCCAC 50.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 50.0% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 50.0% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 87 aa
19-87

Region 19-87 0 PWM

Residues
69 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1A1G
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 19-871 model
Actions
Predicted = Low TFS_Q15930:19:87_1a1g_A_1 1a1g 19-87 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
48-70PF00096Zinc finger, C2H2 typeoverlaps 19-87