ModCRE DB

Transcription factor

Q16124 - HOX

Homeobox protein Hox-B7

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 39 aa

148 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)64
MotifPredictionSourceDNA bindingSupportLogoActions
MA1500.1 NN 70+% JASPAR TTAATTAC 97.2% identity Open · Scan
M00476_2.00 NN 70+% CisBP TTAATGGCC 94.5% identity Open · Scan
M03799_2.00 NN 70+% CisBP GTAATTAC 94.5% identity Open · Scan
M06549_2.00 NN 70+% CisBP TTAATGA 94.5% identity Open · Scan
M09206_2.00 NN 70+% CisBP CATTAATCAA 94.5% identity Open · Scan
MA1498.1 NN 70+% JASPAR GCAATTAC 94.5% identity Open · Scan
MA1501.1 NN 70+% JASPAR GGTAATTAAC 94.5% identity Open · Scan
M00392_2.00 NN 70+% CisBP TTAATTAC 91.8% identity Open · Scan
M00494_2.00 NN 70+% CisBP TTAATTACC 91.8% identity Open · Scan
M09204_2.00 NN 70+% CisBP TTAATGGC 91.8% identity Open · Scan
MA0158.1 NN 70+% JASPAR CACTAATT 91.8% identity Open · Scan
MA0904.1 NN 70+% JASPAR ACGGTAATTAGCTCAT 91.8% identity Open · Scan
MA0904.2 NN 70+% JASPAR GTAATTAC 91.8% identity Open · Scan
MA1497.1 NN 70+% JASPAR GGTAATTAAC 91.8% identity Open · Scan
MA1499.1 NN 70+% JASPAR ATCATTAG 91.8% identity Open · Scan
MA1504.1 NN 70+% JASPAR GTCATTAA 91.8% identity Open · Scan
M06227_2.00 NN 70+% CisBP TTAATTAT 89.1% identity Open · Scan
M09680_2.00 NN 70+% CisBP TTAATTA 89.1% identity Open · Scan
MA1496.1 NN 70+% JASPAR GTCATTAG 89.1% identity Open · Scan
MA1507.1 NN 70+% JASPAR ATCATTAG 89.1% identity Open · Scan
M00422_2.00 NN 70+% CisBP TTAATGA 86.4% identity Open · Scan
M06248_2.00 NN 70+% CisBP TAATTGCC 81.0% identity Open · Scan
M00391_2.00 NN 70+% CisBP TTAATTGCC 78.3% identity Open · Scan
M05312_2.00 NN 70+% CisBP TTAACGAC 78.3% identity Open · Scan
M09582_2.00 NN 70+% CisBP ATGATTGATG 78.3% identity Open · Scan
MA0910.2 NN 70+% JASPAR GCAATTAC 78.3% identity Open · Scan
MA1502.1 NN 70+% JASPAR GCAATTAC 78.3% identity Open · Scan
MA1505.1 NN 70+% JASPAR GTAATTAC 78.3% identity Open · Scan
M06261_2.00 NN 70+% CisBP TTAATTA 76.3% identity Open · Scan
M09214_2.00 NN 70+% CisBP GCATTAATCAA 75.7% identity Open · Scan
M00532_2.00 NN 70+% CisBP TTAATGACC 75.6% identity Open · Scan
M06545_2.00 NN 70+% CisBP TTAATTA 75.6% identity Open · Scan
M10761_2.00 NN 70+% CisBP CATAAAT 75.6% identity Open · Scan
MA0910.1 NN 70+% JASPAR TAAATAATTAATGGCTA 75.6% identity Open · Scan
MA0912.1 NN 70+% JASPAR TTGAGTTAATTAACCT 75.6% identity Open · Scan
MA0912.2 NN 70+% JASPAR CTAATTAC 75.6% identity Open · Scan
M00403_2.00 NN 70+% CisBP CTAATTACC 72.9% identity Open · Scan
M05019_2.00 NN 70+% CisBP GGTCGTAAAAC 72.9% identity Open · Scan
M05105_2.00 NN 70+% CisBP GTCGTAAAAT 72.9% identity Open · Scan
M06281_2.00 NN 70+% CisBP TTAATTA 72.9% identity Open · Scan
M09186_2.00 NN 70+% CisBP ACATAAAT 72.9% identity Open · Scan
MA0485.1 NN 70+% JASPAR GGCCATAAATCAC 72.9% identity Open · Scan
MA0485.2 NN 70+% JASPAR GTCGTAAAAT 72.9% identity Open · Scan
MA0594.1 NN 70+% JASPAR GCCATAAATCA 72.9% identity Open · Scan
MA0594.2 NN 70+% JASPAR GTCGTAAACG 72.9% identity Open · Scan
MA0878.1 NN 70+% JASPAR GCAATAAAA 72.9% identity Open · Scan
MA0900.1 NN 70+% JASPAR CCTAATTACC 72.9% identity Open · Scan
MA0902.1 NN 70+% JASPAR AGTAATTAAC 72.9% identity Open · Scan
MA0903.1 NN 70+% JASPAR ACTAATTAGC 72.9% identity Open · Scan
MA0913.1 NN 70+% JASPAR GCAATAAAAA 72.9% identity Open · Scan
MA0913.2 NN 70+% JASPAR GCAATAAAAC 72.9% identity Open · Scan
M00492_2.00 NN 70+% CisBP TAATTAGC 71.0% identity Open · Scan
M02214_2.00 NN 70+% CisBP AATAATTATA 71.0% identity Open · Scan
M04959_2.00 NN 70+% CisBP GTAATTAC 71.0% identity Open · Scan
M05100_2.00 NN 70+% CisBP TTAACGAC 71.0% identity Open · Scan
M09196_2.00 NN 70+% CisBP TTGATGGATG 71.0% identity Open · Scan
MA1495.1 NN 70+% JASPAR GTAATTAC 71.0% identity Open · Scan
M00410_2.00 NN 70+% CisBP TTTTATGACC 70.2% identity Open · Scan
M02150_2.00 NN 70+% CisBP TTAATTAA 70.2% identity Open · Scan
M02166_2.00 NN 70+% CisBP CTAATTAC 70.2% identity Open · Scan
M02211_2.00 NN 70+% CisBP TTAATTAC 70.2% identity Open · Scan
M03832_2.00 NN 70+% CisBP GGTAATTACC 70.2% identity Open · Scan
MA0465.1 NN 70+% JASPAR AAGCCATAAAA 70.2% identity Open · Scan
MA1503.1 NN 70+% JASPAR GTCGTAAAAT 70.2% identity Open · Scan
Nearest Neighbor (70% - 40%)84
MotifPredictionSourceDNA bindingSupportLogoActions
M05057_2.00 NN 70-40% CisBP TTAATTAC 68.4% identity Open · Scan
M00469_2.00 NN 70-40% CisBP TTAATTACC 67.5% identity Open · Scan
M03104_2.00 NN 70-40% CisBP TTAATTACGGTAATTAC 67.5% identity Open · Scan
M03253_2.00 NN 70-40% CisBP TTTTTATTAC 67.5% identity Open · Scan
M03271_2.00 NN 70-40% CisBP GTAATTAC 67.5% identity Open · Scan
M05272_2.00 NN 70-40% CisBP TTAACGAG 67.5% identity Open · Scan
M05394_2.00 NN 70-40% CisBP GGTCGTAAAAC 67.5% identity Open · Scan
M06329_2.00 NN 70-40% CisBP CACTAATTA 67.5% identity Open · Scan
M09170_2.00 NN 70-40% CisBP TCATAAATCATC 67.5% identity Open · Scan
M09193_2.00 NN 70-40% CisBP TTTTATGGCCTT 67.5% identity Open · Scan
MA0706.1 NN 70-40% JASPAR AGTAATTAAC 67.5% identity Open · Scan
MA0893.1 NN 70-40% JASPAR ACTAATTAAA 67.5% identity Open · Scan
MA0899.1 NN 70-40% JASPAR GGTAATAAAAA 67.5% identity Open · Scan
MA0905.1 NN 70-40% JASPAR GTCGTAAAAT 67.5% identity Open · Scan
MA1473.1 NN 70-40% JASPAR GGCAATAAAAC 67.5% identity Open · Scan
MA1506.1 NN 70-40% JASPAR GGTCGTAAAAC 67.5% identity Open · Scan
M00462_2.00 NN 70-40% CisBP CTAATTG 64.8% identity Open · Scan
MA0132.1 NN 70-40% JASPAR CTAATT 64.8% identity Open · Scan
MA0132.2 NN 70-40% JASPAR GTAATTAG 64.8% identity Open · Scan
MA0661.1 NN 70-40% JASPAR GCTAATTAAC 64.8% identity Open · Scan
MA0889.1 NN 70-40% JASPAR ACTAATTAGC 64.8% identity Open · Scan
MA0890.1 NN 70-40% JASPAR ACCAATTAGC 64.8% identity Open · Scan
M06264_2.00 NN 70-40% CisBP GCTAATTA 63.8% identity Open · Scan
M02205_2.00 NN 70-40% CisBP CATTAATTACC 62.1% identity Open · Scan
M03775_2.00 NN 70-40% CisBP GTTTTATGTGTTTT 62.1% identity Open · Scan
M06224_2.00 NN 70-40% CisBP ATCATAAAA 62.1% identity Open · Scan
M00388_2.00 NN 70-40% CisBP CTAATTGCTT 59.4% identity Open · Scan
M06544_2.00 NN 70-40% CisBP GTAATTA 59.4% identity Open · Scan
MA0707.1 NN 70-40% JASPAR GGTAATTAAA 59.4% identity Open · Scan
M03276_2.00 NN 70-40% CisBP GCTAATTAGC 58.3% identity Open · Scan
M06238_2.00 NN 70-40% CisBP TCTTAATTAG 58.3% identity Open · Scan
MA0642.1 NN 70-40% JASPAR CCCAATTAGC 58.3% identity Open · Scan
M06312_2.00 NN 70-40% CisBP TTAATTA 56.7% identity Open · Scan
M06504_2.00 NN 70-40% CisBP TTAAGTG 56.7% identity Open · Scan
M00496_2.00 NN 70-40% CisBP TTAAGTGGTT 55.5% identity Open · Scan
MA0027.1 NN 70-40% JASPAR AAGTAGTGCCC 55.5% identity Open · Scan
MA0027.2 NN 70-40% JASPAR CTAATTAG 55.5% identity Open · Scan
MA0887.1 NN 70-40% JASPAR GGTAATTAGC 55.5% identity Open · Scan
MA0888.1 NN 70-40% JASPAR GGTAATTAGC 55.5% identity Open · Scan
M06232_2.00 NN 70-40% CisBP TTAATGA 55.2% identity Open · Scan
MA0876.1 NN 70-40% JASPAR CCAATTAA 55.2% identity Open · Scan
M06323_2.00 NN 70-40% CisBP ATTAATTG 54.0% identity Open · Scan
MA0122.1 NN 70-40% JASPAR TTAAGTGGA 54.0% identity Open · Scan
MA0122.2 NN 70-40% JASPAR ACCACTTAA 54.0% identity Open · Scan
M02153_2.00 NN 70-40% CisBP GCCCAATAAA 52.7% identity Open · Scan
M03798_2.00 NN 70-40% CisBP GGTAATTAGC 52.7% identity Open · Scan
M06241_2.00 NN 70-40% CisBP CGTTAATTATTT 52.7% identity Open · Scan
MA0709.1 NN 70-40% JASPAR CCAATTAA 52.7% identity Open · Scan
M00508_2.00 NN 70-40% CisBP TTTTATGACC 52.6% identity Open · Scan
M01245_2.00 NN 70-40% CisBP TTTTATTACC 52.6% identity Open · Scan
M02165_2.00 NN 70-40% CisBP CTTAATTGG 52.6% identity Open · Scan
MA0906.1 NN 70-40% JASPAR GGTCGTAAAAA 52.6% identity Open · Scan
M02046_2.00 NN 70-40% CisBP TCATTAATTAT 52.1% identity Open · Scan
M00497_2.00 NN 70-40% CisBP TTAAGTGGT 51.3% identity Open · Scan
M00520_2.00 NN 70-40% CisBP CTTAAGTGCT 51.3% identity Open · Scan
M02170_2.00 NN 70-40% CisBP TTAATTAG 51.3% identity Open · Scan
M03815_2.00 NN 70-40% CisBP TTAATTAG 51.3% identity Open · Scan
M05042_2.00 NN 70-40% CisBP GTCAAGTGGT 51.3% identity Open · Scan
M05392_2.00 NN 70-40% CisBP GTTAAGTGC 51.3% identity Open · Scan
M06286_2.00 NN 70-40% CisBP CTTAAGTG 51.3% identity Open · Scan
M06554_2.00 NN 70-40% CisBP TTAATTG 51.3% identity Open · Scan
M10754_2.00 NN 70-40% CisBP CAAGTGCGTG 51.3% identity Open · Scan
MA0063.1 NN 70-40% JASPAR TTAATTG 51.3% identity Open · Scan
MA0063.2 NN 70-40% JASPAR ACCACTCAAAA 51.3% identity Open · Scan
MA0119.1 NN 70-40% JASPAR TGGCACCATGCCAA 51.3% identity Open · Scan
MA0124.1 NN 70-40% JASPAR ATACTTA 51.3% identity Open · Scan
MA0124.2 NN 70-40% JASPAR ACCACTTAA 51.3% identity Open · Scan
MA0618.1 NN 70-40% JASPAR TTAATTAG 51.3% identity Open · Scan
MA0651.1 NN 70-40% JASPAR GGTCGTAAAAT 51.3% identity Open · Scan
MA0672.1 NN 70-40% JASPAR ACCACTTGAA 51.3% identity Open · Scan
MA0673.1 NN 70-40% JASPAR CCACTTGAA 51.3% identity Open · Scan
MA0896.1 NN 70-40% JASPAR ACAAGCAATTAATGAAT 51.3% identity Open · Scan
MA0898.1 NN 70-40% JASPAR ACAAGCAATTAAAGAAT 51.3% identity Open · Scan
MA0908.1 NN 70-40% JASPAR GTCGTAAAAA 51.3% identity Open · Scan
M00464_2.00 NN 70-40% CisBP CTAATTACC 50.0% identity Open · Scan
M04906_2.00 NN 70-40% CisBP ATAACGAC 50.0% identity Open · Scan
M06539_2.00 NN 70-40% CisBP CTAATTA 50.0% identity Open · Scan
M06548_2.00 NN 70-40% CisBP TTAATTG 50.0% identity Open · Scan
MA0666.1 NN 70-40% JASPAR CCAATTAG 50.0% identity Open · Scan
MA0708.1 NN 70-40% JASPAR CCAATTAA 50.0% identity Open · Scan
MA0722.1 NN 70-40% JASPAR CTAATTAC 50.0% identity Open · Scan
MA0723.1 NN 70-40% JASPAR CTAATTAC 50.0% identity Open · Scan
MA0882.1 NN 70-40% JASPAR CCAATTAC 50.0% identity Open · Scan
MA0886.1 NN 70-40% JASPAR GCTAATTAGC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 39 aa
1-38

Region 1-38 0 PWM

Residues
38 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1DU0
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-381 model
Actions
Predicted = Low DIMER_Q16124:1:38_1du0_A_1 1du0 1-38 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
2-38PF00046Homeodomainoverlaps 1-38