ModCRE DB

Transcription factor

Q16509 - tal-1

TAL-1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 331 aa

14 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0091.1 NN 70+% JASPAR CGACCATCTGTT 99.6% identity Open · Scan
MA0140.1 NN 70+% JASPAR CTGGTGGGGACAGATAAG 92.7% identity Open · Scan
Nearest Neighbor (70% - 40%)12
MotifPredictionSourceDNA bindingSupportLogoActions
M00756_2.00 NN 70-40% CisBP CGCAGCTGTG 64.7% identity Open · Scan
MA0048.1 NN 70-40% JASPAR GCGCAGCTGCGT 64.7% identity Open · Scan
MA1529.1 NN 70-40% JASPAR GGGCCGCAGCTGCGTCCC 64.7% identity Open · Scan
M05965_2.00 NN 70-40% CisBP AAAAACACCTGCGCC 62.0% identity Open · Scan
M04156_2.00 NN 70-40% CisBP AACAGCTGACGC 56.8% identity Open · Scan
MA1618.1 NN 70-40% JASPAR AAACAGATGTTTA 56.8% identity Open · Scan
M01718_2.00 NN 70-40% CisBP AACATATGGT 55.9% identity Open · Scan
MA0633.1 NN 70-40% JASPAR ACCATATGTT 55.9% identity Open · Scan
MA1123.1 NN 70-40% JASPAR ATTCCAGATGTTT 52.4% identity Open · Scan
MA0607.1 NN 70-40% JASPAR CCATATGT 51.8% identity Open · Scan
MA0461.1 NN 70-40% JASPAR CAGATGGC 51.7% identity Open · Scan
MA1467.1 NN 70-40% JASPAR AACAGCTGTC 51.7% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 331 aa
181-247

Region 181-247 0 PWM

Residues
67 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
2YPB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 181-2471 model
Actions
Predicted = Low DIMER_Q16509:181:247_2ypb_A_1 2ypb 181-247 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
188-239PF00010Helix-loop-helix DNA-binding domainoverlaps 181-247