Region 199-393 4 PWM
- Residues
- 195 aa
- Domains
- PF02760 · HIN-200/IF120x domain
- 3D models
- 4 active PDBs · 1 summary row
- Templates
- 4QGU, 5Z7D
- Sources
- Predicted = Low
Transcription factor
Q16666 - IFI16
Gamma-interferon-inducible protein 16 (Ifi-16) (Interferon-inducible myeloid differentiation transcriptional activator)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 785 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE8
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_sp_Q16666_IF16_HUMAN:199:389_4qgu_A_1 | ModCRE | Homology model | GGGT | Region 199-389 · 1 3D model | Open · Scan | |
| TFS_sp_Q16666_IF16_HUMAN:199:393_5z7d_A_1 | ModCRE | Homology model | CCCCCGCATATTTT | Region 199-393 · 1 3D model | Open · Scan | |
| TFS_sp_Q16666_IF16_HUMAN:199:393_5z7d_B_1 | ModCRE | Homology model | ATTTTAGCGCTTTTT | Region 199-393 · 1 3D model | Open · Scan | |
| TFS_sp_Q16666_IF16_HUMAN:199:393_5z7d_C_1 | ModCRE | Homology model | GCCTCTTGCTTTTTA | Region 199-393 · 1 3D model | Open · Scan | |
| TFS_sp_Q16666_IF16_HUMAN:570:766_3rnu_B_1 | ModCRE | Homology model | TTTTCAGAGTAA | Region 570-766 · 1 3D model | Open · Scan | |
| TFS_sp_Q16666_IF16_HUMAN:572:766_3rnu_A_1 | ModCRE | Homology model | TTTTCATTCT | Region 572-766 · 1 3D model | Open · Scan | |
| TFS_sp_Q16666_IF16_HUMAN:572:766_3rnu_C_1 | ModCRE | Homology model | ACACCCCGT | Region 572-766 · 1 3D model | Open · Scan | |
| TFS_sp_Q16666_IF16_HUMAN:572:766_3rnu_D_1 | ModCRE | Homology model | TTTGCC | Region 572-766 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
785 aa
199-393
570-766
Region 570-766 4 PWM
- Residues
- 197 aa
- Domains
- PF02760 · HIN-200/IF120x domain
- 3D models
- 4 active PDBs · 4 summary rows
- Templates
- 3RNU
- Sources
- Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 199-3934 models · 1 summary row
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q16666_IF16_HUMAN:199:389_4qgu_A_1 | 4qgu | 199-389 | View model · PDB |
| Predicted = Low | TFS_sp_Q16666_IF16_HUMAN:199:393_5z7d_A_1 | 5z7d | 199-393 | View model · PDB |
| Predicted = Low | TFS_sp_Q16666_IF16_HUMAN:199:393_5z7d_B_1 | 5z7d | 199-393 | View model · PDB |
| Predicted = Low | TFS_sp_Q16666_IF16_HUMAN:199:393_5z7d_C_1 | 5z7d | 199-393 | View model · PDB |
Model-summary evidence imported for this region.
Region 570-7664 models · 4 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q16666_IF16_HUMAN:570:766_3rnu_B_1 | 3rnu | 570-766 | View model · PDB |
| Predicted = Low | TFS_sp_Q16666_IF16_HUMAN:572:766_3rnu_A_1 | 3rnu | 572-766 | View model · PDB |
| Predicted = Low | TFS_sp_Q16666_IF16_HUMAN:572:766_3rnu_C_1 | 3rnu | 572-766 | View model · PDB |
| Predicted = Low | TFS_sp_Q16666_IF16_HUMAN:572:766_3rnu_D_1 | 3rnu | 572-766 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 2 | 3rnu | 570:766 | 572 | 766 | P:C · DNA:K,L | 100.0% / 100.0% | 97 | View · PDB TFS_sp_Q16666_IF16_HUMAN:572:766_3rnu_C_1 |
| 1 | 3rnu | 570:766 | 570 | 766 | P:B · DNA:K,L | 99.5% / 100.0% | 98 | View · PDB TFS_sp_Q16666_IF16_HUMAN:570:766_3rnu_B_1 |
| 3 | 3rnu | 570:766 | 572 | 766 | P:D · DNA:K,L | 99.5% / 99.5% | 97 | View · PDB TFS_sp_Q16666_IF16_HUMAN:572:766_3rnu_D_1 |
| 4 | 3rnu | 570:766 | 572 | 766 | P:A · DNA:K,L | 99.5% / 99.5% | 97 | View · PDB TFS_sp_Q16666_IF16_HUMAN:572:766_3rnu_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 10-80 | PF02758 | PAAD/DAPIN/Pyrin domain | No overlap with loaded model regions |
| 201-369 | PF02760 | HIN-200/IF120x domain | overlaps 199-393 |
| 575-740 | PF02760 | HIN-200/IF120x domain | overlaps 570-766 |