ModCRE DB

Transcription factor

Q2M1V0 - ISX

Intestine-specific homeobox (RAX-like homeobox)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 245 aa

13 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known13
MotifPredictionSourceDNA bindingSupportLogoActions
MA0654.1 Known JASPAR CTAATTAA Direct PWM Open · Scan
MA0654.2 Known JASPAR TAATTA Direct PWM Open · Scan
M00318_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M00319_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M03218_2.00 Known CisBP TTAATTAGATTAA Direct PWM Open · Scan
M03219_2.00 Known CisBP TTAATTGG Direct PWM Open · Scan
M03220_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05304_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05305_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05306_2.00 Known CisBP TTAACGAG Direct PWM Open · Scan
M05307_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05308_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05309_2.00 Known CisBP TTAACGAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 245 aa
82-140

Region 82-140 0 PWM

Residues
59 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 82-1401 model
Actions
Predicted = Low DIMER_Q2M1V0:82:140_1fjl_A_1 1fjl 82-140 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
83-139PF00046Homeodomainoverlaps 82-140