ModCRE DB

Transcription factor

Q2M3W8 - ZNF181

Zinc finger protein 181 (HHZ181)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 571 aa

62 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07730_2.00 Known CisBP CCCTCAGGTTGTAGGAATGCTGAG Direct PWM Open · Scan
Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70+% CisBP CCACCTCA 72.2% identity Open · Scan
Nearest Neighbor (70% - 40%)60
MotifPredictionSourceDNA bindingSupportLogoActions
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.4% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 65.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 63.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 63.7% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.0% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 63.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 62.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 61.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.4% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 61.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 59.4% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.5% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 58.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 57.9% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 56.7% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.1% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 55.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.8% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 55.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.6% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 55.0% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 54.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 54.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.2% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 54.0% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 53.6% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.3% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 53.2% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 53.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 53.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.9% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.8% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.8% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.8% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 52.7% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.6% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.2% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 52.0% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 51.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.7% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 51.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 51.5% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 51.5% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 51.3% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 51.3% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.0% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 50.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 50.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 50.1% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 50.0% identity Open · Scan
M07627_2.00 NN 70-40% CisBP CAGTCACCTTCTGG 50.0% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 50.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.0% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 50.0% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 571 aa
234-400

Region 234-400 0 PWM

Residues
167 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5UND
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 234-4001 model
Actions
Predicted = Low TFS_Q2M3W8:234:400_5und_A_1 5und 234-400 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-43PF01352KRAB boxNo overlap with loaded model regions
237-259PF00096Zinc finger, C2H2 typeoverlaps 234-400
265-287PF00096Zinc finger, C2H2 typeoverlaps 234-400
293-315PF00096Zinc finger, C2H2 typeoverlaps 234-400
321-343PF00096Zinc finger, C2H2 typeoverlaps 234-400
349-371PF00096Zinc finger, C2H2 typeoverlaps 234-400
377-399PF00096Zinc finger, C2H2 typeoverlaps 234-400
405-427PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
433-455PF13912C2H2-type zinc fingerNo overlap with loaded model regions
461-483PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
489-511PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
517-539PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions