ModCRE DB

Transcription factor

Q2T9G8 - ZNF304

ZNF304 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 617 aa

98 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07587_2.00 NN 70+% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 99.8% identity Open · Scan
Nearest Neighbor (70% - 40%)97
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70-40% CisBP CCCGCTGC 67.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 64.6% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.5% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 62.8% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 62.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 61.1% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 60.8% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 60.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 60.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 59.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.1% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 58.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.3% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 58.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 57.9% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 57.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.6% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 57.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 56.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.9% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.9% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 55.7% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 55.5% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.1% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.9% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 54.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 54.8% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 54.8% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 54.6% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.5% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 54.4% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 54.2% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 54.1% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 54.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.0% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 54.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 54.0% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 53.9% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 53.9% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 53.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.4% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.4% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 53.4% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.4% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.0% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 53.0% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 52.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 52.8% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 52.7% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 52.7% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 52.6% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 52.6% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 52.6% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 52.6% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.5% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.3% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 52.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.8% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 51.8% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.6% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 51.3% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.3% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 51.3% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 51.3% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 51.3% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 51.2% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 51.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.8% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.8% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.7% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.7% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.7% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.6% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 50.6% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.3% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 50.3% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 50.3% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.2% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 50.1% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.1% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 50.0% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 50.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 50.0% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 50.0% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 50.0% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 617 aa
236-397

Region 236-397 0 PWM

Residues
162 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 236-3971 model
Actions
Predicted = Low TFS_Q2T9G8:236:397_5t0u_A_1 5t0u 236-397 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
237-259PF00096Zinc finger, C2H2 typeoverlaps 236-397
265-287PF00096Zinc finger, C2H2 typeoverlaps 236-397
293-315PF00096Zinc finger, C2H2 typeoverlaps 236-397
321-343PF00096Zinc finger, C2H2 typeoverlaps 236-397
349-371PF00096Zinc finger, C2H2 typeoverlaps 236-397
377-399PF00096Zinc finger, C2H2 typeoverlaps 236-397
433-455PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
461-483PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
489-511PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
517-539PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
545-567PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
573-595PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions