ModCRE DB

Transcription factor

Q2TB61 - ZNF268

ZNF268 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 947 aa

66 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)62
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 67.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 62.6% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 61.3% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.1% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.1% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 61.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.0% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 60.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 60.0% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 59.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.6% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 59.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 58.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.7% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 57.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.3% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 56.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 56.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.3% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 55.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 54.1% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 54.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.9% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 53.7% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.5% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 53.2% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 53.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 52.7% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 52.5% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.5% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 52.3% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.3% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.9% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.9% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.8% identity Open · Scan
M06084_2.00 NN 70-40% CisBP AGACCACCCAC 51.6% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 51.4% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 51.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.3% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.2% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 51.1% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 51.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.9% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.4% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 50.0% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 50.0% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_Q2TB61_Q2TB61_HUMAN:498:774_5wjq_D_1 ModCRE Homology model GCGGACCCCCGCCCCACCCCCGGCCCCA Region 498-774 · 1 3D model Open · Scan
TFS_tr_Q2TB61_Q2TB61_HUMAN:555:830_5v3j_E_1 ModCRE Homology model GCTCCCCCCCCCCTCCCCCCCCGGCC Region 555-830 · 1 3D model Open · Scan
TFS_tr_Q2TB61_Q2TB61_HUMAN:555:830_5v3m_C_1 ModCRE Homology model CCCTCCGCCCACCCCCGGCCCCCCCA Region 555-830 · 1 3D model Open · Scan
TFS_tr_Q2TB61_Q2TB61_HUMAN:761:914_2i13_A_1 ModCRE Homology model AATTAAGTACACTAGGTGCCC Region 761-914 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 947 aa
498-914

Region 498-914 4 PWM

Residues
417 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF23561 · C2H2 zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 498-9146 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q2TB61_Q2TB61_HUMAN:610:661_1llm_D_1 1llm 610-661 View model · PDB
Predicted = Low TFS_tr_Q2TB61_Q2TB61_HUMAN:498:774_5wjq_D_1 5wjq 498-774 View model · PDB
Predicted = Low TFS_tr_Q2TB61_Q2TB61_HUMAN:529:826_7w1m_H_1 7w1m 529-826 View model · PDB
Predicted = Low TFS_tr_Q2TB61_Q2TB61_HUMAN:555:830_5v3j_E_1 5v3j 555-830 View model · PDB
Predicted = Low TFS_tr_Q2TB61_Q2TB61_HUMAN:555:830_5v3m_C_1 5v3m 555-830 View model · PDB
Predicted = Low TFS_tr_Q2TB61_Q2TB61_HUMAN:761:914_2i13_A_1 2i13 761-914 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 449:942 761 914 P:A · DNA:C,D 59.1% / 69.5% 100 View · PDB TFS_tr_Q2TB61_Q2TB61_HUMAN:761:914_2i13_A_1
1 5wjq 449:942 498 774 P:D · DNA:A,B 54.5% / 67.1% 98 View · PDB TFS_tr_Q2TB61_Q2TB61_HUMAN:498:774_5wjq_D_1
2 5v3m 449:942 555 830 P:C · DNA:A,B 54.0% / 67.4% 99 View · PDB TFS_tr_Q2TB61_Q2TB61_HUMAN:555:830_5v3m_C_1
3 5v3j 449:942 555 830 P:E · DNA:A,B 54.0% / 67.4% 99 View · PDB TFS_tr_Q2TB61_Q2TB61_HUMAN:555:830_5v3j_E_1
1 1llm 449:942 610,610 661,661 P:C,D · DNA:A,B 40.4% / 61.5% 59,61 View · PDB DIMER_tr_Q2TB61_Q2TB61_HUMAN:610:661_1llm_D_1
5 7w1m 449:942 529 826 P:H · DNA:F,G 35.5% / 50.5% 92 View · PDB TFS_tr_Q2TB61_Q2TB61_HUMAN:529:826_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
80-121PF01352KRAB boxNo overlap with loaded model regions
306-326PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
332-354PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
360-382PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
388-410PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
416-438PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
444-466PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
476-494PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
500-522PF00096Zinc finger, C2H2 typeoverlaps 498-914
528-550PF00096Zinc finger, C2H2 typeoverlaps 498-914
556-578PF00096Zinc finger, C2H2 typeoverlaps 498-914
584-606PF00096Zinc finger, C2H2 typeoverlaps 498-914
612-634PF00096Zinc finger, C2H2 typeoverlaps 498-914
640-662PF00096Zinc finger, C2H2 typeoverlaps 498-914
670-690PF00096Zinc finger, C2H2 typeoverlaps 498-914
697-722PF23561C2H2 zinc fingeroverlaps 498-914
724-746PF00096Zinc finger, C2H2 typeoverlaps 498-914
752-774PF00096Zinc finger, C2H2 typeoverlaps 498-914
782-802PF00096Zinc finger, C2H2 typeoverlaps 498-914
808-830PF00096Zinc finger, C2H2 typeoverlaps 498-914
836-858PF00096Zinc finger, C2H2 typeoverlaps 498-914
864-886PF00096Zinc finger, C2H2 typeoverlaps 498-914
894-914PF00096Zinc finger, C2H2 typeoverlaps 498-914
920-942PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions