ModCRE DB

Transcription factor

Q32MK9 - ZNF509

HCG2039195, isoform CRA_a (ZNF509 protein)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 248 aa

91 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)85
MotifPredictionSourceDNA bindingSupportLogoActions
M06131_2.00 NN 70-40% CisBP ATGTCAAGCCCAAACAAAACCAAAA 60.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 59.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 57.8% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 57.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 57.8% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 57.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 57.1% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 56.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 56.2% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 56.2% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 56.0% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 55.9% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 55.9% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 55.3% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 54.6% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 54.6% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 54.5% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 54.5% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 54.2% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 54.2% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 54.0% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 53.3% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 53.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 53.1% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 53.1% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 53.1% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 53.1% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 53.1% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 53.1% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.1% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 53.0% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.0% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 53.0% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 52.9% identity Open · Scan
M01441_2.00 NN 70-40% CisBP CCCCTGAATT 52.6% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 52.5% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 52.3% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 52.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 51.5% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 51.5% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 51.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.5% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 51.5% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 51.5% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 51.5% identity Open · Scan
M08239_2.00 NN 70-40% CisBP GGGCCGCTCTAGGCTGCCGG 51.5% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 51.5% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 51.5% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.5% identity Open · Scan
MA0657.1 NN 70-40% JASPAR ATGCCACGCCCCTTTTTG 51.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 51.5% identity Open · Scan
MA0695.1 NN 70-40% JASPAR GCGACCACCGAA 51.4% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 51.4% identity Open · Scan
M01439_2.00 NN 70-40% CisBP TTACGCCACA 51.0% identity Open · Scan
M01199_2.00 NN 70-40% CisBP GCGCCACC 50.9% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 50.8% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 50.8% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.7% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 50.7% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 50.7% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 50.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 50.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 50.0% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 50.0% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 50.0% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 50.0% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.0% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 50.0% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 50.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.0% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 50.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.0% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 50.0% identity Open · Scan
M08977_2.00 NN 70-40% CisBP AAATCACAGC 50.0% identity Open · Scan
MA0073.1 NN 70-40% JASPAR CCCCAAACCACCCCCCCCCA 50.0% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 50.0% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 50.0% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 50.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 50.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.0% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q32MK9_Q32MK9_HUMAN:16:65_1llm_D_1 ModCRE Homology model CACGCGCGCGGT Region 16-65 · 1 3D model Open · Scan
TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml2_A_1 ModCRE Homology model ACATGCGCTGTAAAATG Region 4-68 · 1 3D model Open · Scan
TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml3_A_1 ModCRE Homology model CCCCGCGGTGTGTTCCC Region 4-68 · 1 3D model Open · Scan
TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml4_A_1 ModCRE Homology model ACACTACCTAAAAAATG Region 4-68 · 1 3D model Open · Scan
TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml6_A_1 ModCRE Homology model AGAGCACCTAAAAAATG Region 4-68 · 1 3D model Open · Scan
TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml7_A_1 ModCRE Homology model GCAGCACCTAAAAAAAG Region 4-68 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 248 aa
4-68

Region 4-68 6 PWM

Residues
65 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 6ML2, 6ML3, 6ML4, 6ML6, 6ML7
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 4-686 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q32MK9_Q32MK9_HUMAN:16:65_1llm_D_1 1llm 16-65 View model · PDB
Predicted = Low TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml2_A_1 6ml2 4-68 View model · PDB
Predicted = Low TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml3_A_1 6ml3 4-68 View model · PDB
Predicted = Low TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml4_A_1 6ml4 4-68 View model · PDB
Predicted = Low TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml6_A_1 6ml6 4-68 View model · PDB
Predicted = Low TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml7_A_1 6ml7 4-68 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6ml3 2:76 4 68 P:A · DNA:E,F 50.8% / 66.2% 58 View · PDB TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml3_A_1
2 6ml2 2:76 4 68 P:A · DNA:E,F 50.8% / 66.2% 46 View · PDB TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml2_A_1
3 6ml7 2:76 4 68 P:A · DNA:E,F 50.8% / 66.2% 45 View · PDB TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml7_A_1
4 6ml6 2:76 4 68 P:A · DNA:E,F 50.8% / 66.2% 45 View · PDB TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml6_A_1
5 6ml4 2:76 4 68 P:A · DNA:E,F 50.8% / 66.2% 45 View · PDB TFS_tr_Q32MK9_Q32MK9_HUMAN:4:68_6ml4_A_1
1 1llm 2:76 16,16 65,65 P:C,D · DNA:A,B 46.0% / 64.0% 57,58 View · PDB DIMER_tr_Q32MK9_Q32MK9_HUMAN:16:65_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
18-40PF00096Zinc finger, C2H2 typeoverlaps 4-68
46-68PF00096Zinc finger, C2H2 typeoverlaps 4-68