ModCRE DB

Transcription factor

Q3MIS6 - ZNF528

Zinc finger protein 528

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 628 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA1597.1 Known JASPAR CCCAGGGAAGCCATTTC Direct PWM Open · Scan
M07617_2.00 Known CisBP GAAATGACTTCCCTG Direct PWM Open · Scan
M08249_2.00 Known CisBP CAGAAATGGCTTCC Direct PWM Open · Scan
M08328_2.00 Known CisBP GAAATGACTTCC Direct PWM Open · Scan
M08912_2.00 Known CisBP TCAGAAATGGCTTCCCTGGG Direct PWM Open · Scan
ZN528_HUMAN.H11MO.0.C Known HOCOMOCO CCCAGGGAAGCCATTTCTGA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 628 aa
212-320

Region 212-320 0 PWM

Residues
109 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EH2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 212-3201 model
Actions
Predicted = Low TFS_Q3MIS6:212:320_5eh2_F_1 5eh2 212-320 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
7-48PF01352KRAB boxNo overlap with loaded model regions
213-235PF00096Zinc finger, C2H2 typeoverlaps 212-320
241-263PF00096Zinc finger, C2H2 typeoverlaps 212-320
269-291PF00096Zinc finger, C2H2 typeoverlaps 212-320
297-319PF00096Zinc finger, C2H2 typeoverlaps 212-320
325-347PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
353-375PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
381-403PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
411-431PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
437-459PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
465-487PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
493-515PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
521-543PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
549-571PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
577-599PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
605-627PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions