Region 7-39 1 PWM
- Residues
- 33 aa
- Domains
- No overlapping PFAM annotation recorded
- 3D models
- 1 active PDB · 1 summary row
- Templates
- 2GLI
- Sources
- Predicted = Low
Transcription factor
Q3MN16
Zinc finger protein 292
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 618 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_Q3MN16_Q3MN16_HUMAN:151:172_1a1f_A_1 | ModCRE | Homology model | CCGGCCCG | Region 151-172 · 1 3D model | Open · Scan | |
| TFS_tr_Q3MN16_Q3MN16_HUMAN:151:172_1a1g_A_1 | ModCRE | Homology model | CCCCCAAG | Region 151-172 · 1 3D model | Open · Scan | |
| TFS_tr_Q3MN16_Q3MN16_HUMAN:151:176_8ffz_A_1 | ModCRE | Homology model | GCCCCCCCGCGG | Region 151-176 · 1 3D model | Open · Scan | |
| TFS_tr_Q3MN16_Q3MN16_HUMAN:151:179_1tf3_A_1 | ModCRE | Homology model | CACTTAGAGTTT | Region 151-179 · 1 3D model | Open · Scan | |
| TFS_tr_Q3MN16_Q3MN16_HUMAN:7:39_2gli_A_1 | ModCRE | Homology model | AAGGGCCCGTGGCT | Region 7-39 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
618 aa
7-39
151-179
Region 151-179 4 PWM
- Residues
- 29 aa
- Domains
- PF00096 · Zinc finger, C2H2 type
- 3D models
- 4 active PDBs · 4 summary rows
- Templates
- 1A1F, 1A1G, 1TF3, 8FFZ
- Sources
- Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 7-391 model · 1 summary row
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_Q3MN16_Q3MN16_HUMAN:7:39_2gli_A_1 | 2gli | 7-39 | View model · PDB |
Model-summary evidence imported for this region.
Region 151-1794 models · 4 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_Q3MN16_Q3MN16_HUMAN:151:172_1a1f_A_1 | 1a1f | 151-172 | View model · PDB |
| Predicted = Low | TFS_tr_Q3MN16_Q3MN16_HUMAN:151:172_1a1g_A_1 | 1a1g | 151-172 | View model · PDB |
| Predicted = Low | TFS_tr_Q3MN16_Q3MN16_HUMAN:151:176_8ffz_A_1 | 8ffz | 151-176 | View model · PDB |
| Predicted = Low | TFS_tr_Q3MN16_Q3MN16_HUMAN:151:179_1tf3_A_1 | 1tf3 | 151-179 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 3 | 1a1g | 147:183 | 151 | 172 | P:A · DNA:B,C | 54.5% / 63.6% | 26 | View · PDB TFS_tr_Q3MN16_Q3MN16_HUMAN:151:172_1a1g_A_1 |
| 4 | 1a1f | 147:183 | 151 | 172 | P:A · DNA:B,C | 54.5% / 63.6% | 26 | View · PDB TFS_tr_Q3MN16_Q3MN16_HUMAN:151:172_1a1f_A_1 |
| 2 | 8ffz | 147:183 | 151 | 176 | P:A · DNA:I,J | 38.5% / 53.8% | 8 | View · PDB TFS_tr_Q3MN16_Q3MN16_HUMAN:151:176_8ffz_A_1 |
| 1 | 1tf3 | 147:183 | 151 | 179 | P:A · DNA:E,F | 37.9% / 62.1% | 31 | View · PDB TFS_tr_Q3MN16_Q3MN16_HUMAN:151:179_1tf3_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 53-107 | PF26218 | Zinc finger protein 292, C2H2-type zinc finger | No overlap with loaded model regions |
| 152-176 | PF00096 | Zinc finger, C2H2 type | overlaps 151-179 |
| 264-321 | PF26218 | Zinc finger protein 292, C2H2-type zinc finger | No overlap with loaded model regions |