ModCRE DB

Transcription factor

Q3ZCT1 - ZNF260

Zinc finger protein 260 (Zfp-260)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 412 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known3
MotifPredictionSourceDNA bindingSupportLogoActions
M08395_2.00 Known CisBP GCTGCCTACTCTTCC Direct PWM Open · Scan
M08959_2.00 Known CisBP TTTTTATGGCTGCATAGTATTCCA Direct PWM Open · Scan
ZN260_HUMAN.H11MO.0.C Known HOCOMOCO TTTTTATGGCTGCATAGTATTCCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 412 aa
134-243

Region 134-243 0 PWM

Residues
110 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 134-2431 model
Actions
Predicted = Low TFS_Q3ZCT1:134:243_5egb_A_1 5egb 134-243 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
27-49PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
55-77PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
83-105PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
136-158PF00096Zinc finger, C2H2 typeoverlaps 134-243
164-186PF00096Zinc finger, C2H2 typeoverlaps 134-243
192-214PF00096Zinc finger, C2H2 typeoverlaps 134-243
220-242PF00096Zinc finger, C2H2 typeoverlaps 134-243
248-270PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
276-298PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
304-326PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
332-354PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
375-399PF13465Zinc-finger double domainNo overlap with loaded model regions