Transcription factor

Q3ZCT4 - CLOCK

Circadian locomoter output cycles protein kaput (EC 2.3.1.48)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 846 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
MA0819.1	NN 70+%	JASPAR	AACACGTGTT	99.8% identity		Open · Scan
M01735_2.00	NN 70+%	CisBP	GCCACGTGGC	94.5% identity		Open · Scan

Nearest Neighbor (70% - 40%)4

Motif	Prediction	Source	DNA binding	Support	Actions
M04158_2.00	NN 70-40%	CisBP	TACACGTGTC	63.9% identity	Open · Scan
M01731_2.00	NN 70-40%	CisBP	GGCACGTGTC	63.3% identity	Open · Scan
MA0626.1	NN 70-40%	JASPAR	GGCACGTGTC	63.1% identity	Open · Scan
M05973_2.00	NN 70-40%	CisBP	CACGTGGC	51.7% identity	Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 846 aa

31-89

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 31-891 model

				Actions
Predicted = Low	DIMER_Q3ZCT4:31:89_4h10_B_1	4h10	31-89	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
35-83	PF00010	Helix-loop-helix DNA-binding domain	overlaps 31-89
110-177	PF00989	PAS fold	No overlap with loaded model regions
274-377	PF14598	PAS domain	No overlap with loaded model regions