Transcription factor

Q3ZCX4 - ZNF568

Zinc finger protein 568

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 644 aa

72 Generated PWM 7 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)71

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	69.3% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	67.0% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	65.9% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	65.4% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	65.3% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	64.0% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	63.6% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	63.5% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	63.1% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	63.0% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	62.8% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	62.5% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	62.5% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	62.3% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	61.3% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	61.1% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	60.7% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	60.2% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	59.8% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	59.6% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	59.2% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	59.2% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	58.9% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	58.7% identity		Open · Scan
M04610_2.00	NN 70-40%	CisBP	CGGCGACGCGAACAC	58.3% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	58.0% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	57.7% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	57.7% identity		Open · Scan
M01474_2.00	NN 70-40%	CisBP	CGCCGATCAC	57.6% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	57.6% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	57.6% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	57.2% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	56.7% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	56.5% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	56.3% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	56.1% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	56.1% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	56.1% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	55.8% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	55.2% identity		Open · Scan
M07648_2.00	NN 70-40%	CisBP	GCTTGCAAAAAAAATTTAACTCCCAGCTC	55.2% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	55.1% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	55.0% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	54.5% identity		Open · Scan
M00609_2.00	NN 70-40%	CisBP	GGAAGCCCTA	54.1% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	53.9% identity		Open · Scan
M00217_2.00	NN 70-40%	CisBP	TTACTCAATAT	53.6% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	53.6% identity		Open · Scan
M07747_2.00	NN 70-40%	CisBP	TGGTCTATAAAGGGCCTGGTT	53.1% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	52.8% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	52.7% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	52.6% identity		Open · Scan
M07717_2.00	NN 70-40%	CisBP	GGCTCCGCCCCC	52.1% identity		Open · Scan
M08367_2.00	NN 70-40%	CisBP	GGGGTGATGACCACTCTGGCTTCTTAC	52.1% identity		Open · Scan
M08859_2.00	NN 70-40%	CisBP	CATTTTTTCCTCCTAGGCCT	52.1% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	52.0% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	52.0% identity		Open · Scan
M04590_2.00	NN 70-40%	CisBP	TGCGCTAACCATTGC	51.6% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	51.6% identity		Open · Scan
M07658_2.00	NN 70-40%	CisBP	CCGCCGCAGCCGCCG	51.1% identity		Open · Scan
M07659_2.00	NN 70-40%	CisBP	GTCTTCCAAGTAGCTGGTGTT	51.1% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	51.1% identity		Open · Scan
M01456_2.00	NN 70-40%	CisBP	GTGATCGGCG	50.9% identity		Open · Scan
M07702_2.00	NN 70-40%	CisBP	CTTCTTCCTTGG	50.9% identity		Open · Scan
M07660_2.00	NN 70-40%	CisBP	CCGCGCCTACCTGAGGGCGCGGGCCTGGGG	50.6% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	50.4% identity		Open · Scan
M01044_2.00	NN 70-40%	CisBP	TCTCTCTTTC	50.3% identity		Open · Scan
MA1587.1	NN 70-40%	JASPAR	CCTCGACCTCCTGA	50.3% identity		Open · Scan
M08330_2.00	NN 70-40%	CisBP	TGGGTGCCGGACTGCTGTTCC	50.1% identity		Open · Scan
M03702_2.00	NN 70-40%	CisBP	GACCCCCCACGACGC	50.0% identity		Open · Scan
M08934_2.00	NN 70-40%	CisBP	GCTGTACCTGCTTATTAGGC	50.0% identity		Open · Scan

ModCRE1

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_sp_Q3ZCX4_ZN568_HUMAN:247:357_5ei9_E_1	ModCRE	Homology model	CCGGTGAGGGGGGTGTC	Region 247-357 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 644 aa

247-580

Region 247-580 1 PWM

Residues

334 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

7 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ, 7W1M

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

7 active PDB models 6 summary rows

Region 247-5807 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_sp_Q3ZCX4_ZN568_HUMAN:248:299_1llm_D_1	1llm	248-299	View model · PDB
Predicted = Low	TFS_sp_Q3ZCX4_ZN568_HUMAN:247:357_5ei9_E_1	5ei9	247-357	View model · PDB
Predicted = Low	TFS_sp_Q3ZCX4_ZN568_HUMAN:249:525_5v3j_E_1	5v3j	249-525	View model · PDB
Predicted = Low	TFS_sp_Q3ZCX4_ZN568_HUMAN:249:525_5v3m_C_1	5v3m	249-525	View model · PDB
Predicted = Low	TFS_sp_Q3ZCX4_ZN568_HUMAN:250:548_7w1m_H_1	7w1m	250-548	View model · PDB
Predicted = Low	TFS_sp_Q3ZCX4_ZN568_HUMAN:275:553_5wjq_D_1	5wjq	275-553	View model · PDB
Predicted = Low	TFS_sp_Q3ZCX4_ZN568_HUMAN:427:580_2i13_A_1	2i13	427-580	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	247:637	427	580	P:A · DNA:C,D	59.7% / 75.3%	100	View · PDB TFS_sp_Q3ZCX4_ZN568_HUMAN:427:580_2i13_A_1
1	5wjq	247:637	275	553	P:D · DNA:A,B	53.8% / 68.8%	99	View · PDB TFS_sp_Q3ZCX4_ZN568_HUMAN:275:553_5wjq_D_1
2	5v3m	247:637	249	525	P:C · DNA:A,B	53.8% / 68.2%	100	View · PDB TFS_sp_Q3ZCX4_ZN568_HUMAN:249:525_5v3m_C_1
3	5v3j	247:637	249	525	P:E · DNA:A,B	53.8% / 68.2%	100	View · PDB TFS_sp_Q3ZCX4_ZN568_HUMAN:249:525_5v3j_E_1
1	1llm	247:637	248,248	299,299	P:C,D · DNA:A,B	44.2% / 65.4%	59,61	View · PDB DIMER_sp_Q3ZCX4_ZN568_HUMAN:248:299_1llm_D_1
5	7w1m	247:637	250	548	P:H · DNA:F,G	37.0% / 53.9%	92	View · PDB TFS_sp_Q3ZCX4_ZN568_HUMAN:250:548_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
48-88	PF01352	KRAB box	No overlap with loaded model regions
222-244	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
250-272	PF00096	Zinc finger, C2H2 type	overlaps 247-580
278-300	PF00096	Zinc finger, C2H2 type	overlaps 247-580
306-328	PF00096	Zinc finger, C2H2 type	overlaps 247-580
334-356	PF00096	Zinc finger, C2H2 type	overlaps 247-580
362-384	PF00096	Zinc finger, C2H2 type	overlaps 247-580
390-412	PF00096	Zinc finger, C2H2 type	overlaps 247-580
418-440	PF00096	Zinc finger, C2H2 type	overlaps 247-580
446-468	PF00096	Zinc finger, C2H2 type	overlaps 247-580
474-496	PF00096	Zinc finger, C2H2 type	overlaps 247-580
502-524	PF00096	Zinc finger, C2H2 type	overlaps 247-580
530-552	PF00096	Zinc finger, C2H2 type	overlaps 247-580
558-580	PF00096	Zinc finger, C2H2 type	overlaps 247-580
586-608	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
614-636	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions