ModCRE DB

Transcription factor

Q499G5 - E2F3

E2F3 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 126 aa

15 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0469.1 NN 70+% JASPAR CTCCCGCCCCCACTC 93.2% identity Open · Scan
MA0469.2 NN 70+% JASPAR AAAAATGGCGCCATTTTT 93.2% identity Open · Scan
M01225_2.00 NN 70+% CisBP GGCGCCAAAT 75.4% identity Open · Scan
M01968_2.00 NN 70+% CisBP GCGCGCCAAA 75.4% identity Open · Scan
M06871_2.00 NN 70+% CisBP ATTTGGCGCCAAAA 73.6% identity Open · Scan
Nearest Neighbor (70% - 40%)10
MotifPredictionSourceDNA bindingSupportLogoActions
M01962_2.00 NN 70-40% CisBP TTGGCGCCAA 69.7% identity Open · Scan
M09526_2.00 NN 70-40% CisBP TGCAAACGCGCTCCA 66.1% identity Open · Scan
M09039_2.00 NN 70-40% CisBP GGCGCGAAAC 65.9% identity Open · Scan
MA0864.1 NN 70-40% JASPAR AAAATGGCGCCATTTT 65.9% identity Open · Scan
M01963_2.00 NN 70-40% CisBP TTGGCGCCAA 64.9% identity Open · Scan
M08107_2.00 NN 70-40% CisBP GGGCGGGAAGG 63.8% identity Open · Scan
M01965_2.00 NN 70-40% CisBP TTGGCGCGC 63.6% identity Open · Scan
MA0024.1 NN 70-40% JASPAR TTTGGCGC 63.4% identity Open · Scan
M08196_2.00 NN 70-40% CisBP AAATGCGCGCCAA 60.5% identity Open · Scan
MA0470.1 NN 70-40% JASPAR GGGCGGGAAGG 60.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 126 aa
54-105

Region 54-105 0 PWM

Residues
52 aa
Domains
PF02319 · E2F/DP family winged-helix DNA-binding domain
3D models
1 active PDB
Templates
1CF7
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 54-1051 model
Actions
Predicted = Low TFS_Q499G5:54:105_1cf7_A_1 1cf7 54-105 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
57-105PF02319E2F/DP family winged-helix DNA-binding domainoverlaps 54-105