ModCRE DB

Transcription factor

Q4G180 - ZNF486

ZNF486 protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 503 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07775_2.00 Known CisBP GCCGAAACCCGGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 503 aa
221-496

Region 221-496 0 PWM

Residues
276 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 221-4961 model
Actions
Predicted = Low TFS_Q4G180:221:496_5v3j_E_1 5v3j 221-496 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
53-93PF01352KRAB boxNo overlap with loaded model regions
250-272PF00096Zinc finger, C2H2 typeoverlaps 221-496
278-300PF00096Zinc finger, C2H2 typeoverlaps 221-496
306-328PF00096Zinc finger, C2H2 typeoverlaps 221-496
334-356PF00096Zinc finger, C2H2 typeoverlaps 221-496
362-384PF00096Zinc finger, C2H2 typeoverlaps 221-496
390-412PF00096Zinc finger, C2H2 typeoverlaps 221-496
418-440PF00096Zinc finger, C2H2 typeoverlaps 221-496
446-468PF00096Zinc finger, C2H2 typeoverlaps 221-496
474-496PF00096Zinc finger, C2H2 typeoverlaps 221-496