Transcription factor

Q4LE49 - ARID1A

ARID1A variant protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1374 aa

2 Generated PWM 2 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_tr_Q4LE49_Q4LE49_HUMAN:660:781_1kqq_A_1	ModCRE	Homology model	ATGACAAAATAA	Region 660-781 · 1 3D model		Open · Scan
TFS_tr_Q4LE49_Q4LE49_HUMAN:684:768_2oeh_A_1	ModCRE	Homology model	TTTAAGCGATGAA	Region 684-768 · 1 3D model		Open · Scan

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1374 aa

660-781

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

2 active PDB models 2 summary rows

Region 660-7812 models · 2 summary rows

				Actions
Predicted = Low	TFS_tr_Q4LE49_Q4LE49_HUMAN:660:781_1kqq_A_1	1kqq	660-781	View model · PDB
Predicted = Low	TFS_tr_Q4LE49_Q4LE49_HUMAN:684:768_2oeh_A_1	2oeh	684-768	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	1kqq	660:781	660	781	P:A · DNA:B,C	32.5% / 60.2%	92	View · PDB TFS_tr_Q4LE49_Q4LE49_HUMAN:660:781_1kqq_A_1
2	2oeh	660:781	684	768	P:A · DNA:B,C	22.1% / 54.7%	79	View · PDB TFS_tr_Q4LE49_Q4LE49_HUMAN:684:768_2oeh_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
674-758	PF01388	ARID/BRIGHT DNA binding domain	overlaps 660-781